RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OR1E2P47887 323 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 RFX3P48380 749 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 TMED10P49755 219 aaKnown RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 SSR4P51571 173 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 SLC34A1Q06495 639 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 SKP2Q13309 424 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 LY6DQ14210 128 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 GK3PQ14409 553 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 ZSWIM7Q19AV6 140 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 NDUFAF6Q330K2 333 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 ACER2Q5QJU3 275 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 OGFRL1Q5TC84 451 aaPredicted RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 OR2T5Q6IEZ7 315 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 OPN5Q6U736 354 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 CBLN3Q6UW01 205 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 TMEM179BQ7Z7N9 219 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 CARM1Q86X55 608 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 CATSPERDQ86XM0 798 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 OFCC1Q8IZS5 231 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 KLHDC1Q8N7A1 406 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 NUP37Q8NFH4 326 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 OR10G3Q8NGC4 313 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 OR4C15Q8NGM1 316 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 OR2T29Q8NH02 315 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 PAQR8Q8TEZ7 354 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 CENPNQ96H22 339 aaPredicted RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 ZNF486Q96H40 463 aaPredicted RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 TPD52L3Q96J77 140 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 PRRC1Q96M27 445 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 CCNL2Q96S94 520 aaPredicted RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 KLHDC3Q9BQ90 382 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 ZNF426Q9BUY5 554 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 DGCR6LQ9BY27 220 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 POLR2J2Q9GZM3 115 aaKnown RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 GABARAPL1Q9H0R8 117 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 ING2Q9H160 280 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 POLR2J3Q9H1A7 115 aaKnown RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 YY1AP1Q9H869 796 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 ACER3Q9NUN7 267 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 DNAJB9Q9UBS3 223 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 SLC35A3Q9Y2D2 325 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 SLC9A8Q9Y2E8 581 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 SH3GLB1Q9Y371 365 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 SELENOKQ9Y6D0 94 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 FREM2Q5SZK8 3169 aa3.53□□□□□ -1.85
CLK1-203ENST00000409769 ALPK2Q86TB3 2170 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 GTF3C1Q12789 2109 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 LAMA5O15230 3695 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 CEP295Q9C0D2 2601 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 IGHV3OR16-10A0A075B7F0 116 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 TRBV4-1A0A0J9YWV2 114 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 A0A1W2PRQ8 180 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 K7ENP7 123 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 DLGAP1O14490 977 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 ZNF264O43296 627 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 TRIM3O75382 744 aaPredicted RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 OR5F1O95221 314 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 BAG2O95816 211 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 ANGPTL1O95841 491 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 CST1P01037 141 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 CSTAP01040 98 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 IFNW1P05000 195 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 UBTFL6P0CB48 400 aaPredicted RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 GKN3PP0CG01 181 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 CCL3P10147 92 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 THRBP10828 461 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 PRG2P13727 222 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 PRKACGP22612 351 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 AZGP1P25311 298 aaKnown RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 RRM2P31350 389 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 CASP3P42574 277 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 YAP1P46937 504 aaKnown RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 HLCSP50747 726 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 P2RX1P51575 399 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 IST1P53990 364 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 XGP55808 180 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 RGS8P57771 180 aaPredicted RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 RPP38P78345 283 aaKnown RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 HOXC5Q00444 222 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 ZNF117Q03924 483 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 DGCR6Q14129 220 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 GANABQ14697 944 aaKnown RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 OR1Q1Q15612 314 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 SNCBQ16143 134 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 ZNF239Q16600 458 aaKnown RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 MOGAT2Q3SYC2 334 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 LPCAT4Q643R3 524 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 ZNF770Q6IQ21 691 aaPredicted RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 SHQ1Q6PI26 577 aaKnown RBP3.52□□□□□ -1.85
CLK1-203ENST00000409769 TBPL2Q6SJ96 375 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 ISLR2Q6UXK2 745 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 WDR88Q6ZMY6 472 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 RTL4Q6ZR62 310 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 ZNF550Q7Z398 422 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 MARCH3Q86UD3 253 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 MISPQ8IVT2 679 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 HS3ST5Q8IZT8 346 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 TMEM156Q8N614 296 aa3.52□□□□□ -1.85
CLK1-203ENST00000409769 FADS6Q8N9I5 356 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms