RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 METRNLQ641Q3 311 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TFAP2EQ6VUC0 442 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 CORO2AQ92828 525 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SHISA4Q96DD7 197 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF2Q9BSG1 426 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TXNIPQ9H3M7 391 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 IGHV3-21A0A0B4J1V1 117 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 NTN1O95631 604 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 GPX3P22352 226 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TRA2BP62995 288 aaKnown RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF260Q3ZCT1 412 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF425Q6IV72 752 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 OR52I1Q8NGK6 324 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 OR2G3Q8NGZ4 309 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ELP4Q96EB1 424 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 MS4A8Q9BY19 250 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 COLQQ9Y215 455 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SIGLEC1Q9BZZ2 1709 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 APC2O95996 2303 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF195O14628 629 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 CBR3O75828 277 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 RPL13AP40429 203 aaKnown RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 HIST2H3AQ71DI3 136 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 LAX1Q8IWV1 398 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF331Q9NQX6 463 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ASB4Q9Y574 426 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM235A6NFC5 223 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 AMTP48728 403 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 REEP5Q00765 189 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM123Q8N131 208 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 LRRC61Q9BV99 259 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 PTDSS2Q9BVG9 487 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 ZDHHC5Q9C0B5 715 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 YBX2Q9Y2T7 364 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 PDCD11Q14690 1871 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 IGHV3OR16-10A0A075B7F0 116 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 ACOT8O14734 319 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 SPP1P10451 314 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 CCR2P41597 374 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF121P58317 390 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 PFN3P60673 137 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 RPL27P61353 136 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 SPATS1Q496A3 300 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 L3MBTL4Q8NA19 623 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 GPR55Q9Y2T6 319 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 DIDO1Q9BTC0 2240 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 LOC102724200A0A096LPH7 203 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF573Q86YE8 665 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 HS3ST2Q9Y278 367 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 POLDIP2Q9Y2S7 368 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 MBLAC1A4D2B0 266 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 SULT1A3P0DMM9 295 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 SULT1A4P0DMN0 295 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 HIST1H1CP16403 213 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 CD40P25942 277 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 RAB1AP62820 205 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 GUCA2BQ16661 112 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 PXDC1Q5TGL8 231 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 SLC25A26Q70HW3 274 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 NKAIN4Q8IVV8 208 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 UBE2FQ969M7 185 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 PGAP3Q96FM1 320 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 MMP25Q9NPA2 562 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 IGHV3OR15-7A0A075B7D8 119 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 ALDOCP09972 364 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 TNFAIP6P98066 277 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 RAB40BQ12829 278 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 IAH1Q2TAA2 248 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 H3F3CQ6NXT2 135 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 FAAP20Q6NZ36 180 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 ACOXLQ9NUZ1 547 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 IGKV6D-21A0A0A0MT36 114 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 PCBP4P57723 403 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 DPY19L2P2Q6ZN68 376 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 OR4A4PQ8NGN8 299 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 OR13C5Q8NGS8 318 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 GALMQ96C23 342 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 MKS1Q9NXB0 559 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 FAM53CQ9NYF3 392 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 P2RX6O15547 441 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 DNAJB6O75190 326 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 FGF7P21781 194 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 TRIM23P36406 574 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 LCN8Q6JVE9 175 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 SLC48A1Q6P1K1 146 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 TIPARPQ7Z3E1 657 aaKnown RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 RND1Q92730 232 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 FAM3DQ96BQ1 224 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 MS4A7Q9GZW8 240 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 CELA2BP08218 269 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-203ENST00000409672 C19orf57Q0VDD7 668 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 KCNG3Q8TAE7 436 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 PIK3IP1Q96FE7 263 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 LIPGQ9Y5X9 500 aa7.63□□□□□ -1.19
SCN9A-203ENST00000409672 SETD1AO15047 1707 aaKnown RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 IGKV6-21A0A0C4DH24 114 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 FGF17O60258 216 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 PATE4P0C8F1 98 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 STEAP1BQ6NZ63 245 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms