RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 H1FNTQ75WM6 255 aaPredicted RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 LRRTM1Q86UE6 522 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 ACBD7Q8N6N7 88 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 C3orf56Q8N813 242 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 OR10D4PQ8NGN7 298 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 LKAAEAR1Q8TD35 194 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 PSMF1Q92530 271 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 GGHQ92820 318 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 PDLIM5Q96HC4 596 aaKnown RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 NICN1Q9BSH3 213 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 C20orf24Q9BUV8 137 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 STEAP1Q9UHE8 339 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 CITO14578 2027 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 CLDN24A6NM45 220 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 UMAD1C9J7I0 102 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 LYZL6O75951 148 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 RAF1P04049 648 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 OR13C7P0DN81 318 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 WDR4P57081 412 aaKnown RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 TAS2R19P59542 299 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 CLDN22Q8N7P3 220 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 OR1J1Q8NGS3 322 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 NT5CQ8TCD5 201 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 PRO1933Q9H354 126 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 SYNPO2LQ9H987 977 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 TAAR3PQ9P1P4 343 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 RHCGQ9UBD6 479 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 GDF2Q9UK05 429 aaPredicted RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 A0A1W2PNR3 127 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 C9orf172C9J069 976 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 M0R1X1 148 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 IGLV3-25P01717 112 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 SCGB1A1P11684 91 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 FABP4P15090 132 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 ELK1P19419 428 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 IL2RGP31785 369 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 GCGRP47871 477 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 KLF3P57682 345 aaPredicted RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 EBPQ15125 230 aaKnown RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 CD300LGQ6UXG3 332 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 TPRA1Q86W33 373 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 SPICQ8N5J4 248 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 TMEM174Q8WUU8 243 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 EID2BQ96D98 161 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 MYEOVQ96EZ4 313 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 TP53RKQ96S44 253 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 CYSLTR2Q9NS75 346 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 CLCF1Q9UBD9 225 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 CYB5R1Q9UHQ9 305 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 KCNG2Q9UJ96 466 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 ARAP2Q8WZ64 1704 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF320A2RRD8 509 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 ICOSLGO75144 302 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 MT-ND4P03905 459 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 MAS1P04201 325 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 SULT1A3P0DMM9 295 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 SULT1A4P0DMN0 295 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 NAGAP17050 411 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 HOXA1P49639 335 aaPredicted RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 TCTAP57738 103 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 ETFDHQ16134 617 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 Q5PR19 223 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 C1orf140Q5VVS0 124 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 AWAT2Q6E213 333 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 VASNQ6EMK4 673 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 LRRC28Q86X40 367 aaPredicted RBP6.6□□□□□ -1.35
SCN9A-202ENST00000409435 OR10X1Q8NGY0 326 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 HAVCR2Q8TDQ0 301 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 UBTD2Q8WUN7 234 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 AK3Q9UIJ7 227 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 RNF115Q9Y4L5 304 aa6.6□□□□□ -1.35
SCN9A-202ENST00000409435 C5orf49A4QMS7 147 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 SLC16A7O60669 478 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 B3GALT4O96024 378 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 SUMO3P55854 103 aaPredicted RBP6.59□□□□□ -1.35
SCN9A-202ENST00000409435 RTL6Q6ICC9 239 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 KDF1Q8NAX2 398 aaPredicted RBP6.59□□□□□ -1.35
SCN9A-202ENST00000409435 OR10G3Q8NGC4 313 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 OR4K13Q8NH42 304 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 HSD17B8Q92506 261 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 TOMM40LQ969M1 308 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 SAT2Q96F10 170 aaPredicted RBP6.59□□□□□ -1.35
SCN9A-202ENST00000409435 LRR1Q96L50 414 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 SORCS2Q96PQ0 1159 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 TTTY12Q9BZ98 90 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 CISD1Q9NZ45 108 aaKnown RBP6.59□□□□□ -1.35
SCN9A-202ENST00000409435 GNG12Q9UBI6 72 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 NRXN2Q9P2S2 1712 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 LAMB1P07942 1786 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 ACOD1A6NK06 481 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 RGS11O94810 467 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 LAMP1P11279 417 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 NPPBP16860 134 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 CD81P60033 236 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 HBG1P69891 147 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 HBG2P69892 147 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 B4GALNT1Q00973 533 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF90Q03938 601 aa6.59□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF154Q13106 437 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms