RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CBX3Q13185 183 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 ELFN2Q5R3F8 820 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 SLC25A25Q6KCM7 469 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 HRASLSQ9HDD0 168 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 NAP1L6A6NFF2 107 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 ARGFXA6NJG6 315 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 MAGEA5P43359 124 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 SRYQ05066 204 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 CCDC92Q53HC0 331 aaPredicted RBP21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 DOK3Q7L591 496 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 ADGRE4PQ86SQ3 457 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 CPT1CQ8TCG5 803 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 FAM71F1Q96KD3 344 aaPredicted RBP21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 CRLF2Q9HC73 371 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 ZNF319Q9P2F9 582 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 ANKRD20A5PA0PJZ0 165 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 CDRT15L2A8MXV6 281 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 F5H5K5 113 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 ERCC1P07992 297 aaPredicted RBP21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 LHX2P50458 406 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 GFOD2Q3B7J2 385 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 GALNTL5Q7Z4T8 443 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 BIVMQ86UB2 503 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 SLC22A24Q8N4F4 322 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 TMEM251Q8N6I4 163 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 OR13C9Q8NGT0 318 aa21.71■■□□□ 1.07
DNMT3A-206ENST00000406659 OTOGLQ3ZCN5 2332 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 CIB4A0PJX0 185 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 PRR33A8MZF0 331 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 KLRC4-KLRK1H3BQV0 150 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 CDK2AP1O14519 115 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 NME2P1O60361 137 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 RBBP9O75884 186 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 KDM4BO94953 1096 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 CCL1P22362 96 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 NME2P22392 152 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 SLC6A9P48067 706 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 MEOX1P50221 254 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 NKX2-5P52952 324 aaPredicted RBP21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 DNM1P46Q6ZS02 220 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 BTN2A1Q7KYR7 527 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 LYPD6Q86Y78 171 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 MDS2Q8NDY4 140 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 OR52N4Q8NGI2 321 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 FBXO17Q96EF6 278 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 SLC6A15Q9H2J7 730 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 NEK6Q9HC98 313 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 PLEK2Q9NYT0 353 aa21.7■■□□□ 1.06
DNMT3A-206ENST00000406659 NCOA6Q14686 2063 aaPredicted RBP21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 APOC1P02654 83 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 GABRA1P14867 456 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 RRADP55042 308 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 ZFP69Q49AA0 526 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 ZNF529Q6P280 563 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 PGAP1Q75T13 922 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 MEIOBQ8N635 442 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 OR4D6Q8NGJ1 314 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 ABHD3Q8WU67 409 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 DMRTB1Q96MA1 342 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 CNTD2Q9H8S5 307 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 TMEM38BQ9NVV0 291 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 MED13Q9UHV7 2174 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 SYNGR4O95473 234 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 CST2P09228 141 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 H2AFB2P0C5Z0 115 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 CD46P15529 392 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 ABOP16442 354 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 RRAS2P62070 204 aaPredicted RBP21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 CD83Q01151 205 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 KCNJ8Q15842 424 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 SFRP4Q6FHJ7 346 aaPredicted RBP21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 AKAP1Q92667 903 aaKnown RBP eCLIP21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 SPTSSAQ969W0 71 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 UQCC2Q9BRT2 126 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 METTL17Q9H7H0 456 aaPredicted RBP21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 MOV10Q9HCE1 1003 aaKnown RBP21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 RANGRFQ9HD47 186 aaPredicted RBP21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 POU2F3Q9UKI9 436 aa21.69■■□□□ 1.06
DNMT3A-206ENST00000406659 LDLRAD4O15165 306 aa21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 PRSS3P35030 304 aa21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 CLDN18P56856 261 aa21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 NAA40Q86UY6 237 aa21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 PTX4Q96A99 478 aa21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 ALKBH3Q96Q83 286 aaPredicted RBP21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 SOX7Q9BT81 388 aa21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 BEX2Q9BXY8 128 aa21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 MYEF2Q9P2K5 600 aaKnown RBP21.68■■□□□ 1.06
DNMT3A-206ENST00000406659 A0A0A6YYJ9 748 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 H7C417 338 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 GMDSO60547 372 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 PPIAP62937 165 aaKnown RBP21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 RIPPLY2Q5TAB7 128 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 OLFML2AQ68BL7 652 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 ZNF627Q7L945 461 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 TMEM45BQ96B21 275 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 ACTR6Q9GZN1 396 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 MTFP1Q9UDX5 166 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 RHBDD3Q9Y3P4 386 aa21.67■■□□□ 1.06
DNMT3A-206ENST00000406659 M0R135 149 aa21.66■■□□□ 1.06
DNMT3A-206ENST00000406659 ZNF708P17019 499 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms