RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 ASB9Q96DX5 294 aa17.71■□□□□ 0.43
RHBDD3-202ENST00000406335 POLR1DQ9Y2S0 133 aa17.71■□□□□ 0.43
RHBDD3-202ENST00000406335 LHFPL6Q9Y693 200 aa17.71■□□□□ 0.43
RHBDD3-202ENST00000406335 CDH10Q9Y6N8 788 aa17.71■□□□□ 0.43
RHBDD3-202ENST00000406335 OR6C6A6NF89 314 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 DBHP09172 617 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 RBMXP38159 391 aaKnown RBP17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 CORO6Q6QEF8 472 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 LINC00471Q8N535 108 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 NPEPL1Q8NDH3 523 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 LRGUKQ96M69 825 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 BEX1Q9HBH7 125 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 KLHL21Q9UJP4 597 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 PPP1R3CQ9UQK1 317 aa17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 POLR3KQ9Y2Y1 108 aaPredicted RBP17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 SAMHD1Q9Y3Z3 626 aaKnown RBP17.7■□□□□ 0.42
RHBDD3-202ENST00000406335 H3BSA7 217 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 BHLHE40O14503 412 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 SURF4O15260 269 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 IDH3BO43837 385 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 IGHV4-38-2P0DP08 117 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 ZMYND11Q15326 602 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 LRRN1Q6UXK5 716 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 ZBTB46Q86UZ6 589 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 ADGRG5Q8IZF4 528 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 MUC20Q8N307 709 aaPredicted RBP17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 KIR3DL3Q8N743 410 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 AQP11Q8NBQ7 271 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 SLC26A10Q8NG04 563 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 OR1F12Q8NHA8 337 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 TBCCD1Q9NVR7 557 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 IL20Q9NYY1 176 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 STARD10Q9Y365 291 aa17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 SOX21Q9Y651 276 aaPredicted RBP17.69■□□□□ 0.42
RHBDD3-202ENST00000406335 HOXA3O43365 443 aaPredicted RBP17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 RAP2AP10114 183 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 MDH2P40926 338 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 HIST1H3AP68431 136 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 PAX8Q06710 450 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 PSG7Q13046 419 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 CDK5R2Q13319 367 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 HIST2H3PS2Q5TEC6 136 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 RASSF6Q6ZTQ3 369 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 HIST2H3AQ71DI3 136 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 LINC00346Q8IVM7 164 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 ZNF283Q8N7M2 679 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 ATG16L2Q8NAA4 619 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 CYB561A3Q8NBI2 242 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 OR52L1Q8NGH7 329 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 SSBP3Q9BWW4 388 aaPredicted RBP17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 REEP1Q9H902 201 aa17.68■□□□□ 0.42
RHBDD3-202ENST00000406335 A0A1B0GUS0 222 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 SOX14O95416 240 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 PYCR1P32322 319 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 CD80P33681 288 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 GNB2P62879 340 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 SRSF4Q08170 494 aaKnown RBP17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 TRAP1Q12931 704 aaKnown RBP17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 MICAQ29983 383 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 TUSC1Q2TAM9 212 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 ZNF362Q5T0B9 420 aaPredicted RBP17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 RPL13AP3Q6NVV1 102 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 PGM2L1Q6PCE3 622 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 BRICD5Q6PL45 260 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 GJC3Q8NFK1 279 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 OR4F5Q8NH21 305 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 CANT1Q8WVQ1 401 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 ITLN1Q8WWA0 313 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 SLC7A6OSQ96CW6 309 aaPredicted RBP17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 DDOQ99489 341 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 TBC1D23Q9NUY8 699 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 LRCH1Q9Y2L9 728 aa17.67■□□□□ 0.42
RHBDD3-202ENST00000406335 TRAV40A0A0B4J280 105 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 MDFIC2A0A1B0GVS7 189 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 A8MXK9 166 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 M0QZ24 198 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 RPS2P15880 293 aaKnown RBP17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 COX10Q12887 443 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 CFAP77Q6ZQR2 320 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 OR4Q3Q8NH05 313 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 ZNRF4Q8WWF5 429 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 CMBLQ96DG6 245 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 PLEKHA8Q96JA3 519 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 CHID1Q9BWS9 393 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 TSSK6Q9BXA6 273 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 DGCR6LQ9BY27 220 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 ARMC1Q9NVT9 282 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 MRPL22Q9NWU5 206 aaKnown RBP17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 IL19Q9UHD0 177 aa17.66■□□□□ 0.42
RHBDD3-202ENST00000406335 FAM181BA6NEQ2 426 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 CEACAM18A8MTB9 384 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 GYG2O15488 501 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 CST1P01037 141 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 HLA-DQA2P01906 255 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 ERFP50548 548 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 RSPO1Q2MKA7 263 aaPredicted RBP17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 SLC18B1Q6NT16 456 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 LYPD4Q6UWN0 246 aa17.65■□□□□ 0.42
RHBDD3-202ENST00000406335 TMEM179BQ7Z7N9 219 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms