RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ZNF254O75437 659 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 KRT8P05787 483 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 LCKP06239 509 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 FAM157BP0CG42 384 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 DBTP11182 482 aaKnown RBP9.09□□□□□ -0.95
RPAIN-204ENST00000405578 LOXP28300 417 aaPredicted RBP9.09□□□□□ -0.95
RPAIN-204ENST00000405578 APOBEC3AP31941 199 aaPredicted RBP9.09□□□□□ -0.95
RPAIN-204ENST00000405578 GLRXP35754 106 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 EGR3Q06889 387 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 MALLQ13021 153 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 CDK5R2Q13319 367 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 MOGQ16653 247 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 KRTAP24-1Q3LI83 254 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 AGAP6Q5VW22 663 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 VHLLQ6RSH7 139 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF322Q6U7Q0 402 aaPredicted RBP9.09□□□□□ -0.95
RPAIN-204ENST00000405578 DRAM2Q6UX65 266 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 USP51Q70EK9 711 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 FAM220AQ7Z4H9 259 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 MYPOPQ86VE0 399 aaPredicted RBP9.09□□□□□ -0.95
RPAIN-204ENST00000405578 ACBD7Q8N6N7 88 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF283Q8N7M2 679 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF611Q8N823 705 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 ABHD4Q8TB40 342 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 CNIH3Q8TBE1 160 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 SNX33Q8WV41 574 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 APOBEC3DQ96AK3 386 aaPredicted RBP9.09□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF799Q96GE5 643 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF442Q9H7R0 627 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 AMBNQ9NP70 447 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 INPP5EQ9NRR6 644 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 CHCHD3Q9NX63 227 aaKnown RBP9.09□□□□□ -0.95
RPAIN-204ENST00000405578 SCN3BQ9NY72 215 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 IKZF2Q9UKS7 526 aa9.09□□□□□ -0.95
RPAIN-204ENST00000405578 EFCAB10A6NFE3 127 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 E7EQL1 145 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 H3BSA7 217 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 ICMTO60725 284 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 WBP4O75554 376 aaKnown RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 APOL3O95236 402 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 PLAUP00749 431 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 LCATP04180 440 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 TACSTD2P09758 323 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 OR4A8P0C604 315 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 MYL12AP19105 171 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 MYF6P23409 242 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 DCKP27707 260 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 GCH1P30793 250 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 SERPINF1P36955 418 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 OPRL1P41146 370 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 PRKXP51817 358 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 RIDAP52758 137 aaKnown RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 CXCR4P61073 352 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 ACTA2P62736 377 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 ACTG2P63267 376 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 ROM1Q03395 351 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 HGFACQ04756 655 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 TNK1Q13470 666 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF829Q3KNS6 432 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF718Q3SXZ3 478 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 RGS7BPQ6MZT1 257 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 PLEKHG7Q6ZR37 379 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF679Q8IYX0 411 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 PAQR4Q8N4S7 273 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 BPIFB6Q8NFQ5 453 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 OR1J1Q8NGS3 322 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 SMAP2Q8WU79 429 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 APH1BQ8WW43 257 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 LGALS12Q96DT0 336 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 CNBD2Q96M20 576 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 TBX5Q99593 518 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 OR51B6Q9H340 312 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 PNRC2Q9NPJ4 139 aaKnown RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 AASSQ9UDR5 926 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 GPR160Q9UJ42 338 aa9.08□□□□□ -0.96
RPAIN-204ENST00000405578 EXOGQ9Y2C4 368 aaKnown RBP9.08□□□□□ -0.96
RPAIN-204ENST00000405578 A0A1W2PQL4 384 aaPredicted RBP9.07□□□□□ -0.96
RPAIN-204ENST00000405578 ACOD1A6NK06 481 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 B9A039 149 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 RNF223E7ERA6 249 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 FAM20BO75063 409 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 SULT1C4O75897 302 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 MT-ND5P03915 603 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 ANXA2P07355 339 aaKnown RBP9.07□□□□□ -0.96
RPAIN-204ENST00000405578 DBHP09172 617 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 ACSM4P0C7M7 580 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 OTX1P32242 354 aaPredicted RBP9.07□□□□□ -0.96
RPAIN-204ENST00000405578 DCTDP32321 178 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 TTKP33981 857 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 THBS4P35443 961 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 WNT5AP41221 380 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 CX3CR1P49238 355 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 HCCSP53701 268 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 PPP1CBP62140 327 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 SNRPD2P62316 118 aaKnown RBP9.07□□□□□ -0.96
RPAIN-204ENST00000405578 SMN1Q16637 294 aaKnown RBP9.07□□□□□ -0.96
RPAIN-204ENST00000405578 CHRFAM7AQ494W8 412 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 LRRN1Q6UXK5 716 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 KCTD20Q7Z5Y7 419 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms