RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 RBM4Q9BWF3 364 aaKnown RBP11.23□□□□□ -0.61
SDF4-203ENST00000403997 A0A0G2JMP0 313 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 A0A0X1KG70 313 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 AQP12BA6NM10 295 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 RIIAD1A6NNX1 92 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 ARHGAP32A7KAX9 2087 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 IFNL4K9M1U5 179 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 M0R135 149 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 ZNF593O00488 134 aaPredicted RBP11.22□□□□□ -0.61
SDF4-203ENST00000403997 GYG2O15488 501 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 IFNGP01579 166 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 SPARCP09486 303 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 CLUP10909 449 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 SLC6A9P48067 706 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 SRP9P49458 86 aaKnown RBP11.22□□□□□ -0.61
SDF4-203ENST00000403997 SLC25A1P53007 311 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 PRSS12P56730 875 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 GK3PQ14409 553 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 GK2Q14410 553 aaPredicted RBP11.22□□□□□ -0.61
SDF4-203ENST00000403997 TAF13Q15543 124 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 MRPL21Q7Z2W9 205 aaKnown RBP11.22□□□□□ -0.61
SDF4-203ENST00000403997 DCXRQ7Z4W1 244 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 LRRC28Q86X40 367 aaPredicted RBP11.22□□□□□ -0.61
SDF4-203ENST00000403997 AQP12AQ8IXF9 295 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 KLHL36Q8N4N3 616 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 SPICQ8N5J4 248 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 OR4M2Q8NGB6 313 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 OR10S1Q8NGN2 331 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 CANT1Q8WVQ1 401 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 OTULINQ96BN8 352 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 GCM1Q9NP62 436 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 CENPMQ9NSP4 180 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 COMMD3-BMI1R4GMX3 469 aa11.22□□□□□ -0.61
SDF4-203ENST00000403997 LOC105371242A0A075B767 164 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 DHRS12A0PJE2 317 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 F5H5P2 479 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 H3BN98 237 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 TMEM178BH3BS89 294 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 MLNRO43193 412 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 FOXH1O75593 365 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 AVPP01185 164 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 HLA-DPB1P04440 258 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 ZNF3P17036 446 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 SPI1P17947 270 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 ENTPD1P49961 510 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 BTG1P62324 171 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 SCGB2A2Q13296 93 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 ZMYND11Q15326 602 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 DNAL1Q4LDG9 190 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 TMEM155Q4W5P6 130 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 CD300LDQ6UXZ3 194 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
SDF4-203ENST00000403997 PGAP1Q75T13 922 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 SPATA24Q86W54 205 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 TEX29Q8N6K0 151 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 OR6K6Q8NGW6 343 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 ZNF420Q8TAQ5 688 aaPredicted RBP11.21□□□□□ -0.61
SDF4-203ENST00000403997 TEX47Q8TBZ9 253 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 SPRYD4Q8WW59 207 aaPredicted RBP11.21□□□□□ -0.61
SDF4-203ENST00000403997 COPS4Q9BT78 406 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 TMPRSS13Q9BYE2 586 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 NMNAT2Q9BZQ4 307 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 C7orf69Q9H7B7 122 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 PATZ1Q9HBE1 687 aaKnown RBP11.21□□□□□ -0.61
SDF4-203ENST00000403997 CMC2Q9NRP2 79 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 DDX28Q9NUL7 540 aaKnown RBP11.21□□□□□ -0.61
SDF4-203ENST00000403997 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 PDP1Q9P0J1 537 aaPredicted RBP11.21□□□□□ -0.61
SDF4-203ENST00000403997 N6AMT1Q9Y5N5 214 aa11.21□□□□□ -0.61
SDF4-203ENST00000403997 TANC2Q9HCD6 1990 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 FAM183AA6NL82 134 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 J3QLI3 93 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 E2F6O75461 281 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 PSKH1P11801 424 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 HOXB6P17509 224 aaKnown RBP11.2□□□□□ -0.62
SDF4-203ENST00000403997 GATA3P23771 443 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
SDF4-203ENST00000403997 POU1F1P28069 291 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 MMP16P51512 607 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 PRKXP51817 358 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 BLVRAP53004 296 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 SNAI3Q3KNW1 292 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 TEX30Q5JUR7 227 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 DRAM2Q6UX65 266 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 TMEM179BQ7Z7N9 219 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 MOGAT3Q86VF5 341 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 IQCF1Q8N6M8 205 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 SLAMF6Q96DU3 332 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 SIGLEC11Q96RL6 698 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 MED20Q9H944 212 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 STAB1Q9NY15 2570 aa11.2□□□□□ -0.62
SDF4-203ENST00000403997 ARRDC5A6NEK1 342 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 GGT3PA6NGU5 568 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 ZNF205O95201 554 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 CYB5R3P00387 301 aaPredicted RBP11.19□□□□□ -0.62
SDF4-203ENST00000403997 EPHA1P21709 976 aa11.19□□□□□ -0.62
SDF4-203ENST00000403997 OTX1P32242 354 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms