RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HADHBP55084 474 aaKnown RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 ATP6V0D1P61421 351 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 PRR3P79522 188 aaKnown RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 EBI3Q14213 229 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 TSC22D1Q15714 1073 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 ORMDL2Q53FV1 153 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 SMUG1Q53HV7 270 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 HSP90AA4PQ58FG1 418 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 TFDP3Q5H9I0 405 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 ADNP2Q6IQ32 1131 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 NKAIN4Q8IVV8 208 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 CMTM8Q8IZV2 173 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 TRAM1L1Q8N609 369 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 COX18Q8N8Q8 333 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 SPERTQ8NA61 448 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR5T3Q8NGG3 340 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 MITD1Q8WV92 249 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 RPEQ96AT9 228 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 C19orf60Q96EN9 201 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 GALNT14Q96FL9 552 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 FBXO44Q9H4M3 255 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLC38A10Q9HBR0 1119 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 PRSS16Q9NQE7 514 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 FAM49BQ9NUQ9 324 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 CLN6Q9NWW5 311 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZMAT5Q9UDW3 170 aaKnown RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 DDX19BQ9UMR2 479 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 BZW2Q9Y6E2 419 aaKnown RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 PCDH11XQ9BZA7 1347 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 CARMIL3Q8ND23 1372 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 A0A0J9YYE9 177 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 LOC100653049A0A140TA62 436 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 A0A1B0GUH1 482 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 C5orf63A6NC05 138 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR6C74A6NCV1 312 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 SERPINE3A8MV23 424 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF99A8MXY4 864 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 KRT34O76011 436 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 TRBC1P01850 177 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 IVLP07476 585 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 PGA5P0DJD9 388 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 CD37P11049 281 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 RAB3AP20336 220 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 GPR1P46091 355 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 CLDN18P56856 261 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 TAS2R46P59540 309 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 ESRRGP62508 458 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 ARG2P78540 354 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 CYP24A1Q07973 514 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 ART3Q13508 389 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 STK38Q15208 465 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 QPRTQ15274 297 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 RPEL1Q2QD12 228 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 HNRNPA1L2Q32P51 320 aaKnown RBP2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 LINC00483Q53H64 154 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 FAM78AQ5JUQ0 283 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 STUMQ69YW2 141 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 NTM-AS1Q6ZSK4 140 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 HORMAD1Q86X24 394 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 VKORC1L1Q8N0U8 176 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 PROKR2Q8NFJ6 384 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR11H7Q8NGC8 314 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR8U1Q8NH10 309 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 RAB1CQ92928 201 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 EXOSC8Q96B26 276 aaKnown RBP2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 STARD4Q96DR4 205 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 JSRP1Q96MG2 331 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF488Q96MN9 340 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 NDFIP1Q9BT67 221 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLIRPQ9GZT3 109 aaKnown RBP2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 RPP21Q9H633 154 aaKnown RBP2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF430Q9H8G1 570 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 AGPAT3Q9NRZ7 376 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLC17A7Q9P2U7 560 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 RAB26Q9ULW5 256 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGSF9BQ9UPX0 1349 aa2.38□□□□□ -2.03
HMGB1P17-201ENST00000403495 TNS2Q63HR2 1409 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 LOC100506127A0A0U1RQW1 187 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 TMEM120BA0PK00 339 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF879B4DU55 563 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 NDUFC2-KCTD14E9PQ53 114 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 RAD51BO15315 384 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 GCM2O75603 506 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 CTDNEP1O95476 244 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 SNAI1O95863 264 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGHV1-8P0DP01 117 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 TNFSF9P41273 254 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 CD151P48509 253 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 CCNG1P51959 295 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF33AQ06730 810 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLC39A6Q13433 755 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 Q3ZCU0 254 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 H3F3CQ6NXT2 135 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 WDFY1Q8IWB7 410 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 LGI3Q8N145 548 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 KIF2BQ8N4N8 673 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 CSGALNACT2Q8N6G5 542 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 TRIML2Q8N7C3 387 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 INO80EQ8NBZ0 244 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR6Q1Q8NGQ2 317 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms