RNA–Protein interactions for RNA: ENST00000403076.5

SDC1-203, Transcript of syndecan 1, humanhuman

TSL 1 (best) BASIC

Gene SDC1, Length 1,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-203ENST00000403076 KIR2DL3P43628 341 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 RGS6P49758 472 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 CDK5R1Q15078 307 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 GFOD2Q3B7J2 385 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 WDR38Q5JTN6 314 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 SYT6Q5T7P8 510 aaPredicted RBP15.64■□□□□ 0.09
SDC1-203ENST00000403076 LIPKQ5VXJ0 399 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 FDX2Q6P4F2 183 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 SEZ6L2Q6UXD5 910 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 PRSS35Q8N3Z0 413 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 ZNF676Q8N7Q3 588 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 RADILQ96JH8 1075 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 OR10A2Q9H208 303 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 G6PC2Q9NQR9 355 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 FRRS1LQ9P0K9 344 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 ST6GALNAC2Q9UJ37 374 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 SIRT4Q9Y6E7 314 aaPredicted RBP15.64■□□□□ 0.09
SDC1-203ENST00000403076 HCFC1P51610 2035 aa15.64■□□□□ 0.09
SDC1-203ENST00000403076 C19orf84I3L1E1 186 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 TFAP2AP05549 437 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 KIR3DL2P43630 455 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 RPL5P46777 297 aaKnown RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 CCR9P51686 369 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 GP2P55259 537 aaKnown RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 TPBGQ13641 420 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 OR52H1Q8NGJ2 320 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 OR5AK2Q8NH90 309 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 ABHD4Q8TB40 342 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 RNF166Q96A37 237 aaPredicted RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 APOBEC3DQ96AK3 386 aaPredicted RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 C1QTNF5Q9BXJ0 243 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 COMMD4Q9H0A8 199 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 ESRP2Q9H6T0 727 aaKnown RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 NUFIP1Q9UHK0 495 aaKnown RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 PRSS44E7EML9 344 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 FAM157BP0CG42 384 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 ZNF35P13682 527 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 WNT5AP41221 380 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 DMKNQ6E0U4 476 aaPredicted RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 UNQ6126/PRO20091Q6UXV3 157 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 ZNF704Q6ZNC4 412 aaPredicted RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 COMMD2Q86X83 199 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 ELMOD2Q8IZ81 293 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 OR8B12Q8NGG6 310 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 SMIM19Q96E16 107 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 PDCD1LG2Q9BQ51 273 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 SLC24A3Q9HC58 644 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 CRIM1Q9NZV1 1036 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 SPEF1Q9Y4P9 236 aa15.63■□□□□ 0.09
SDC1-203ENST00000403076 KLF2Q9Y5W3 355 aaPredicted RBP15.63■□□□□ 0.09
SDC1-203ENST00000403076 DPRXA6NFQ7 191 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 OR4C45A6NMZ5 311 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 CCRL2O00421 344 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 PLPP2O43688 288 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 ATE1O95260 518 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 NGFP01138 241 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 CPEP16870 476 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 CALCRP30988 508 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 RAD52P43351 418 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 BSPH1Q075Z2 132 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 MALLQ13021 153 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 GPR50Q13585 617 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 SNAI3Q3KNW1 292 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 PRSS45Q7RTY3 260 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 GPR141Q7Z602 305 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 ZNF101Q8IZC7 436 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 OR5L1Q8NGL2 311 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 GHSRQ92847 366 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 PLPPR2Q96GM1 343 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 TBCCD1Q9NVR7 557 aa15.62■□□□□ 0.09
SDC1-203ENST00000403076 HEATR1Q9H583 2144 aaKnown RBP15.61■□□□□ 0.09
SDC1-203ENST00000403076 C5orf63A6NC05 138 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 TMEM212A6NML5 194 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 H3BSH0 61 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 P2RY10O00398 339 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 ABCD4O14678 606 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 ZFPL1O95159 310 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 TTRP02766 147 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 EPXP11678 715 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 PCSK6P29122 969 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 LIPAP38571 399 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 ALDH3B2P48448 385 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 UCP2P55851 309 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 BEX5Q5H9J7 111 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 NCMAPQ5T1S8 102 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 TMEM244Q5VVB8 128 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 SLC22A25Q6T423 547 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 MEX3BQ6ZN04 569 aaKnown RBP15.61■□□□□ 0.09
SDC1-203ENST00000403076 COLCA1Q6ZS62 124 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 PHC2Q8IXK0 858 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 DMRTC2Q8IXT2 367 aaPredicted RBP15.61■□□□□ 0.09
SDC1-203ENST00000403076 OR51E1Q8TCB6 317 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 TMIGD2Q96BF3 282 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 TMED9Q9BVK6 235 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 ZNF319Q9P2F9 582 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 ZNF281Q9Y2X9 895 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 STARD10Q9Y365 291 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 RELNP78509 3460 aa15.61■□□□□ 0.09
SDC1-203ENST00000403076 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms