RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SPTSSAQ969W0 71 aa22.43■■□□□ 1.18
CPNE1-205ENST00000401607 ADAT3Q96EY9 351 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-205ENST00000401607 PGAM5Q96HS1 289 aa22.43■■□□□ 1.18
CPNE1-205ENST00000401607 GMPPAQ96IJ6 420 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-205ENST00000401607 TRIB1Q96RU8 372 aa22.43■■□□□ 1.18
CPNE1-205ENST00000401607 ZNF224Q9NZL3 707 aa22.43■■□□□ 1.18
CPNE1-205ENST00000401607 A6NIN4 97 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 SS18L1O75177 396 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-205ENST00000401607 CSF3P09919 207 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 CALCBP10092 127 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 SLC6A9P48067 706 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 FAPQ12884 760 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 DTX3Q8N9I9 347 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 OR5M9Q8NGP3 310 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 OR5V1Q9UGF6 321 aa22.42■■□□□ 1.18
CPNE1-205ENST00000401607 SPTBN2O15020 2390 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 ECH1Q13011 328 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 SFRP5Q5T4F7 317 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 RPUSD3Q6P087 351 aaKnown RBP22.41■■□□□ 1.18
CPNE1-205ENST00000401607 UBE2J2Q8N2K1 259 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 CMTM3Q96MX0 182 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 WACQ9BTA9 647 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 MRI1Q9BV20 369 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 FREM1Q5H8C1 2179 aa22.41■■□□□ 1.18
CPNE1-205ENST00000401607 A0A0G2JMP0 313 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 A0A0X1KG70 313 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 MAGEB3O15480 346 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 APOC1P02654 83 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 CD37P11049 281 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 TALDO1P37837 337 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 HGFACQ04756 655 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 TRIM16LQ309B1 348 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 PLEKHN1Q494U1 663 aaPredicted RBP22.4■■□□□ 1.18
CPNE1-205ENST00000401607 UBE2NLQ5JXB2 153 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 COMMD2Q86X83 199 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 POC5Q8NA72 575 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 PLPP7Q8NBV4 271 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 OR4M2Q8NGB6 313 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 SLC25A38Q96DW6 304 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 LYZL4Q96KX0 146 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 STEAP1Q9UHE8 339 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 ARHGAP21Q5T5U3 1957 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 ITGA5P08648 1049 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 OR3A2P47893 321 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 FAM166AQ6J272 317 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 SERPINA12Q8IW75 414 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 ABHD17AQ96GS6 310 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 FAM71F1Q96KD3 344 aaPredicted RBP22.4■■□□□ 1.18
CPNE1-205ENST00000401607 GLRX2Q9NS18 164 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 TBC1D24Q9ULP9 559 aa22.4■■□□□ 1.18
CPNE1-205ENST00000401607 hCG_2014768A0A024R1R8 64 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 A0A096LPE4 126 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 A0A1W2PPZ6 126 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 A0A1W2PQ09 198 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 ADRB1P08588 477 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 HTR5AP47898 357 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 SPOCK1Q08629 439 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 TBR1Q16650 682 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 GFOD2Q3B7J2 385 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 DRAM2Q6UX65 266 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 DOK3Q7L591 496 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 FGD2Q7Z6J4 655 aa22.39■■□□□ 1.17
CPNE1-205ENST00000401607 A0A0U1RQV5 110 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 SLC17A2O00624 439 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 DDOSTP39656 456 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 TPTEP56180 551 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 GUSBP1Q15486 140 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 SNAI3Q3KNW1 292 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 FBXW9Q5XUX1 488 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 CMTM4Q8IZR5 234 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 MINDY2Q8NBR6 621 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 OR14K1Q8NGZ2 314 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 COX4I2Q96KJ9 171 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 NKX3-1Q99801 234 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-205ENST00000401607 LUZP4Q9P127 313 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 OR14I1A6ND48 311 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 RRP8O43159 456 aaKnown RBP22.38■■□□□ 1.17
CPNE1-205ENST00000401607 OCMP0CE72 109 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-205ENST00000401607 PITPNBP48739 271 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 GLT8D1Q68CQ7 371 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 ZNF529Q6P280 563 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 LYPD6Q86Y78 171 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 GCNT2Q8N0V5 402 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 Q8N402 240 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 ETV7Q9Y603 341 aa22.38■■□□□ 1.17
CPNE1-205ENST00000401607 APC2O95996 2303 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 MEGF11A6BM72 1044 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 ABOP16442 354 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 GNALP38405 381 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 SLC36A2Q495M3 483 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 ACSF3Q4G176 576 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-205ENST00000401607 PABPC1L2AQ5JQF8 200 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 MED12LQ86YW9 2145 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 C9orf106Q8NAJ2 232 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 TP53TG5Q9Y2B4 290 aa22.37■■□□□ 1.17
CPNE1-205ENST00000401607 LOC390937A0A1W2PQ73 354 aa22.36■■□□□ 1.17
CPNE1-205ENST00000401607 ZNF503-AS2A6NEH8 195 aa22.36■■□□□ 1.17
CPNE1-205ENST00000401607 IL18BPO95998 194 aa22.36■■□□□ 1.17
CPNE1-205ENST00000401607 SCAND1P57086 179 aa22.36■■□□□ 1.17
CPNE1-205ENST00000401607 Q6ZSR3 168 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms