RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SULT1C4O75897 302 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 GLRXP35754 106 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 ZNF121P58317 390 aaPredicted RBP13.72□□□□□ -0.21
HMGA1-204ENST00000401473 RBM48Q5RL73 367 aaKnown RBP13.72□□□□□ -0.21
HMGA1-204ENST00000401473 SPATA46Q5T0L3 261 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 DRAM2Q6UX65 266 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 OR1J1Q8NGS3 322 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 ABHD4Q8TB40 342 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 SIGLEC11Q96RL6 698 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 DCLRE1CQ96SD1 692 aaKnown RBP13.72□□□□□ -0.21
HMGA1-204ENST00000401473 DOK1Q99704 481 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 INPP5EQ9NRR6 644 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 ERVK-18Q9QC07 812 aa13.72□□□□□ -0.21
HMGA1-204ENST00000401473 RPP14O95059 124 aaKnown RBP13.71□□□□□ -0.21
HMGA1-204ENST00000401473 LCATP04180 440 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 CDK1P06493 297 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 DCTDP32321 178 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 RIDAP52758 137 aaKnown RBP13.71□□□□□ -0.21
HMGA1-204ENST00000401473 TMEM255AQ5JRV8 349 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 OR2G6Q5TZ20 316 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 STX19Q8N4C7 294 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 YIPF7Q8N8F6 280 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 NRGNQ92686 78 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 RORBQ92753 470 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 C4orf36Q96KX1 117 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 BCL2L14Q9BZR8 327 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 OR2J1Q9GZK6 312 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 LIME1Q9H400 295 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 ACOXLQ9NUZ1 547 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 GNG8Q9UK08 70 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 FZR1Q9UM11 496 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 TPRKBQ9Y3C4 175 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 SPEF1Q9Y4P9 236 aa13.71□□□□□ -0.21
HMGA1-204ENST00000401473 TMEM269A0A1B0GVZ9 245 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 IRGMA1A4Y4 181 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 J3QLW9 94 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 KRT8P05787 483 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 LCKP06239 509 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 HTR1AP08908 422 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF19P17023 458 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 FABP6P51161 128 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 MMP16P51512 607 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 MFGE8Q08431 387 aaPredicted RBP13.7□□□□□ -0.22
HMGA1-204ENST00000401473 DOC2BQ14184 412 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 ADIPOQQ15848 244 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 ARL9Q6T311 187 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 LRP11Q86VZ4 500 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF485Q8NCK3 441 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 SLC25A40Q8TBP6 338 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 APOBEC3DQ96AK3 386 aaPredicted RBP13.7□□□□□ -0.22
HMGA1-204ENST00000401473 MARS2Q96GW9 593 aaKnown RBP13.7□□□□□ -0.22
HMGA1-204ENST00000401473 NIPAL2Q9H841 368 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 CCDC168Q8NDH2 2452 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 CYSRT1A8MQ03 144 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 E9PI62 339 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 HS3ST1O14792 307 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 ANXA2P07355 339 aaKnown RBP13.7□□□□□ -0.22
HMGA1-204ENST00000401473 PSMB10P40306 273 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 PPP1CBP62140 327 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 HLXQ14774 488 aaPredicted RBP13.7□□□□□ -0.22
HMGA1-204ENST00000401473 FAM57BQ71RH2 274 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 KCTD20Q7Z5Y7 419 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 PELI1Q96FA3 418 aa13.7□□□□□ -0.22
HMGA1-204ENST00000401473 TMEM129A0AVI4 362 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 CLPTM1O96005 669 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 OR4A8P0C604 315 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 DANCRP0C864 163 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 APOBEC3AP31941 199 aaPredicted RBP13.69□□□□□ -0.22
HMGA1-204ENST00000401473 RGS6P49758 472 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 PRSS12P56730 875 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 PSMA6P60900 246 aaKnown RBP13.69□□□□□ -0.22
HMGA1-204ENST00000401473 MST1LQ2TV78 715 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 KLF14Q8TD94 323 aaPredicted RBP13.69□□□□□ -0.22
HMGA1-204ENST00000401473 IPCEF1Q8WWN9 437 aaPredicted RBP13.69□□□□□ -0.22
HMGA1-204ENST00000401473 MYDGFQ969H8 173 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 FBXW5Q969U6 566 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 CDCA4Q9BXL8 241 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF442Q9H7R0 627 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 G6PC2Q9NQR9 355 aa13.69□□□□□ -0.22
HMGA1-204ENST00000401473 EXOSC1Q9Y3B2 195 aaKnown RBP13.69□□□□□ -0.22
HMGA1-204ENST00000401473 LALBAP00709 142 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 APOC1P02654 83 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF250P15622 560 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 MYL12AP19105 171 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 TTKP33981 857 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 MPV17P39210 176 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 ACTA2P62736 377 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 ACTG2P63267 376 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF92Q03936 586 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 GK2Q14410 553 aaPredicted RBP13.68□□□□□ -0.22
HMGA1-204ENST00000401473 XAF1Q6GPH4 301 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 RGS7BPQ6MZT1 257 aaPredicted RBP13.68□□□□□ -0.22
HMGA1-204ENST00000401473 SYS1Q8N2H4 156 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 SPRYD4Q8WW59 207 aaPredicted RBP13.68□□□□□ -0.22
HMGA1-204ENST00000401473 GATAD2BQ8WXI9 593 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 SGK3Q96BR1 496 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 DHRS9Q9BPW9 319 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 MRPL37Q9BZE1 423 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms