RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 EPXP11678 715 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 CPEP16870 476 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 MSR1P21757 451 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 SDC2P34741 201 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
SKA3-203ENST00000400018 RPS11P62280 158 aaKnown RBP eCLIP10.22□□□□□ -0.77
SKA3-203ENST00000400018 PSG4Q00888 419 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 FAM27E3Q08E93 113 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 MLLT11Q13015 90 aaPredicted RBP10.22□□□□□ -0.77
SKA3-203ENST00000400018 CCBE1Q6UXH8 406 aaPredicted RBP10.22□□□□□ -0.77
SKA3-203ENST00000400018 FAM57BQ71RH2 274 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 FJX1Q86VR8 437 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 OR6Q1Q8NGQ2 317 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 OR2AJ1Q8NGZ0 328 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 GRPEL2Q8TAA5 225 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 STARD4Q96DR4 205 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 SPACA5Q96QH8 159 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 KCNK15Q9H427 330 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 MYEF2Q9P2K5 600 aaKnown RBP10.22□□□□□ -0.77
SKA3-203ENST00000400018 OSGIN2Q9Y236 505 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 TMEM269A0A1B0GVZ9 245 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 UPK1BO75841 260 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 CDRT1O95170 752 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 CRYABP02511 175 aaKnown RBP10.22□□□□□ -0.77
SKA3-203ENST00000400018 TAF13Q15543 124 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 SNAI3Q3KNW1 292 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 AGAP6Q5VW22 663 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 FAM214BQ7L5A3 538 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 COMMD2Q86X83 199 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.22□□□□□ -0.77
SKA3-203ENST00000400018 SLC43A2Q8N370 569 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 OR2G2Q8NGZ5 317 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 CPT1CQ8TCG5 803 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 ZC3HAV1LQ96H79 300 aaKnown RBP10.22□□□□□ -0.77
SKA3-203ENST00000400018 RNF121Q9H920 327 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 NDUFB11Q9NX14 153 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 IGKV3D-15A0A087WSY6 115 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 METTL15A6NJ78 407 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 ANXA2P07355 339 aaKnown RBP10.21□□□□□ -0.77
SKA3-203ENST00000400018 PPP5CP53041 499 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 CDK5R1Q15078 307 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 SPATA46Q5T0L3 261 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 DNM1P34Q6PK57 102 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 TFAP2EQ6VUC0 442 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 CEACAM19Q7Z692 300 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 BATF2Q8N1L9 274 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 OR52N1Q8NH53 320 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 DCSTAMPQ9H295 470 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 TRIM36Q9NQ86 728 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 FAM208BQ5VWN6 2430 aa10.21□□□□□ -0.77
SKA3-203ENST00000400018 A0A0G2JNJ9 132 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 LINC01387J3KSC0 135 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 SHOXO15266 292 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 PIN1P1O15428 100 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 AKAP8O43823 692 aaKnown RBP10.21□□□□□ -0.78
SKA3-203ENST00000400018 SSX4O60224 188 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 GABARAPO95166 117 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 GRNP28799 593 aaKnown RBP10.21□□□□□ -0.78
SKA3-203ENST00000400018 GUCA1AP43080 201 aaPredicted RBP10.21□□□□□ -0.78
SKA3-203ENST00000400018 CLDN12P56749 244 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 ZNF121P58317 390 aaPredicted RBP10.21□□□□□ -0.78
SKA3-203ENST00000400018 POU4F2Q12837 409 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 PABPC1L2AQ5JQF8 200 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 CXorf67Q86X51 503 aaPredicted RBP10.21□□□□□ -0.78
SKA3-203ENST00000400018 ZNF679Q8IYX0 411 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 ZNF676Q8N7Q3 588 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 IL17RDQ8NFM7 739 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 NPRL2Q8WTW4 380 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 FAM71F1Q96KD3 344 aaPredicted RBP10.21□□□□□ -0.78
SKA3-203ENST00000400018 GAL3ST1Q99999 423 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 BARHL1Q9BZE3 327 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 C1orf198Q9H425 327 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 Q9UFV3 132 aa10.21□□□□□ -0.78
SKA3-203ENST00000400018 NPIPB13A6NJU9 1138 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 NPIPB4C9JG80 1138 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 ZNF587BE7ETH6 402 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 GLI4P10075 376 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 SLC2A2P11168 524 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 ZNF84P51523 738 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 GBX2P52951 348 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 ACTC1P68032 377 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 ACTA1P68133 377 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 ACSM3Q53FZ2 586 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 IGSF11Q5DX21 431 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 DMKNQ6E0U4 476 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 ZNF474Q6S9Z5 364 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 ZNF283Q8N7M2 679 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 ABHD4Q8TB40 342 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 OR51E1Q8TCB6 317 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 SNAPC3Q92966 411 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 DVL3Q92997 716 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 SLC30A2Q9BRI3 323 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 SLA2Q9H6Q3 261 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 CRIM1Q9NZV1 1036 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 EMC3Q9P0I2 261 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 LOC100509620A0A075B734 347 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 CIB4A0PJX0 185 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 GPR171O14626 319 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 DNPH1O43598 174 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms