RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TRAV14DV4A0A0A6YYC5 116 aa10.4□□□□□ -0.74
ITSN1-211ENST00000399355 OR4E1P0C645 316 aa10.4□□□□□ -0.74
ITSN1-211ENST00000399355 CCL2P13500 99 aa10.4□□□□□ -0.74
ITSN1-211ENST00000399355 DHRS2Q13268 280 aa10.4□□□□□ -0.74
ITSN1-211ENST00000399355 ESCO2Q56NI9 601 aa10.4□□□□□ -0.74
ITSN1-211ENST00000399355 AWAT2Q6E213 333 aa10.4□□□□□ -0.74
ITSN1-211ENST00000399355 NFAM1Q8NET5 270 aaPredicted RBP10.4□□□□□ -0.74
ITSN1-211ENST00000399355 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
ITSN1-211ENST00000399355 TXNDC12O95881 172 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 QDPRP09417 244 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 CD53P19397 219 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 CD96P40200 585 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 CLDN17P56750 224 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 AANATQ16613 207 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 HLA-BQ31612 363 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 YRDCQ86U90 279 aaKnown RBP10.4□□□□□ -0.75
ITSN1-211ENST00000399355 CCDC28AQ8IWP9 274 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 TMEM41AQ96HV5 264 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 MYOTQ9UBF9 498 aa10.4□□□□□ -0.75
ITSN1-211ENST00000399355 IGKV1D-8A0A087WSZ0 117 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 MEX3AA1L020 520 aaKnown RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 K7ESF4 209 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 FOSL2P15408 326 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 PTBP1P26599 531 aaKnown RBP eCLIP10.39□□□□□ -0.755e-10■■■■■ 30.4
ITSN1-211ENST00000399355 PTGDSP41222 190 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 PLAC9Q5JTB6 97 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 TEX30Q5JUR7 227 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 H1FNTQ75WM6 255 aaPredicted RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 NUP54Q7Z3B4 507 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF248Q8NDW4 579 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 ALKBH3Q96Q83 286 aaPredicted RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 PBOV1Q9GZY1 135 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 TMEM231Q9H6L2 316 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 GAREM1Q9H706 876 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 EXOSC3Q9NQT5 275 aaKnown RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 DIABLOQ9NR28 239 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 GDF2Q9UK05 429 aaPredicted RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 ARFGEF3Q5TH69 2177 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 TMEM82A0PJX8 343 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 RAB27BO00194 218 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 IL10RAQ13651 578 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 METTL11BQ5VVY1 283 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 RAET1LQ5VY80 246 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 OGFOD3Q6PK18 319 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 OR8B12Q8NGG6 310 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 PDCD10Q9BUL8 212 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 RBM24Q9BX46 236 aaKnown RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 OR51B6Q9H340 312 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 A0A1B0GUH1 482 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 NUDT1P36639 197 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 PNLIPRP2P54317 469 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 RRADP55042 308 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 EGR3Q06889 387 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 RBMS2Q15434 407 aaKnown RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 C3P1Q6ZMU1 363 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 STEAP2Q8NFT2 490 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 HHLA2Q9UM44 414 aa10.39□□□□□ -0.75
ITSN1-211ENST00000399355 SPTAN1Q13813 2472 aaKnown RBP10.39□□□□□ -0.75
ITSN1-211ENST00000399355 CLRN1P58418 232 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ZBTB44Q8NCP5 570 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 GPER1Q99527 375 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF416Q9BWM5 594 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 UBQLN2Q9UHD9 624 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ZFHX3Q15911 3703 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 MED12LQ86YW9 2145 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 IGKV1-9A0A0C4DH69 117 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 OR2M5A3KFT3 312 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 LIPT2A6NK58 231 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 VSTM2BA6NLU5 285 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF736B4DX44 427 aaPredicted RBP10.38□□□□□ -0.75
ITSN1-211ENST00000399355 TPD52L2O43399 206 aaKnown RBP10.38□□□□□ -0.75
ITSN1-211ENST00000399355 CYB5AP00167 134 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 HCKP08631 526 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 RFPL3SP0C7P2 107 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 SERPINA2P20848 420 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 CXCL12P48061 93 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 LUMP51884 338 aaPredicted RBP10.38□□□□□ -0.75
ITSN1-211ENST00000399355 EPHA4P54764 986 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 RASGEF1BQ0VAM2 473 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 TMUB2Q71RG4 321 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF440Q8IYI8 595 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ACKR4Q9NPB9 350 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ADAMTS20P59510 1910 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 SRSF10O75494 262 aaKnown RBP10.38□□□□□ -0.75
ITSN1-211ENST00000399355 NMBP08949 121 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 SEC61A1P61619 476 aaKnown RBP10.38□□□□□ -0.75
ITSN1-211ENST00000399355 PLPPR5Q32ZL2 321 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 GLIPR1L1Q6UWM5 242 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 GALNT11Q8NCW6 608 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 WBP1Q96G27 269 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ARHGAP5-AS1Q96IT6 56 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 FAM206AQ9NX38 181 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 PTRH2Q9Y3E5 179 aaKnown RBP10.38□□□□□ -0.75
ITSN1-211ENST00000399355 SPEF1Q9Y4P9 236 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 ATRXP46100 2492 aa10.38□□□□□ -0.75
ITSN1-211ENST00000399355 TNFSF11O14788 317 aa10.37□□□□□ -0.75
ITSN1-211ENST00000399355 SSX5O60225 188 aa10.37□□□□□ -0.75
ITSN1-211ENST00000399355 ERCC1P07992 297 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms