RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 DRAM2Q6UX65 266 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 RFLNBQ8N5W9 214 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 OR51L1Q8NGJ5 315 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 SIGLEC11Q96RL6 698 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 WDR76Q9H967 626 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 DCAF16Q9NXF7 216 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 A0A0G2JMP0 313 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 A0A0X1KG70 313 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 TCRBV3S1A0A5B6 114 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 H3BN98 237 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 GNGT2O14610 69 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 MLNRO43193 412 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 DNAJC8O75937 253 aaPredicted RBP12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 GYPBP06028 91 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 PSKH1P11801 424 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 GATA3P23771 443 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 RPS27P42677 84 aaKnown RBP12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 SRP9P49458 86 aaKnown RBP12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 TMEM155Q4W5P6 130 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 LINC01590Q5TEZ4 76 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 PGAP1Q75T13 922 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 DCXRQ7Z4W1 244 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 TMEM179BQ7Z7N9 219 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 NAA40Q86UY6 237 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 SPATA24Q86W54 205 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 PHC2Q8IXK0 858 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 SPICQ8N5J4 248 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 ATG16L2Q8NAA4 619 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 PAPD5Q8NDF8 572 aaKnown RBP12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 OR4M2Q8NGB6 313 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 MEGF10Q96KG7 1140 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 GCM1Q9NP62 436 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 POMPQ9Y244 141 aa12.54□□□□□ -0.4
SMIM11A-203ENST00000399299 PPIAL4EA0A075B759 164 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 PPIAL4CA0A0B4J2A2 164 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 PPIAL4DF5H284 164 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 TMEM178BH3BS89 294 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 J3QLI3 93 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF593O00488 134 aaPredicted RBP12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 E2F6O75461 281 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 SPARCP09486 303 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 PPIAL4FP0DN26 164 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 CLUP10909 449 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 GATA4P43694 442 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 SLC6A9P48067 706 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 MMP16P51512 607 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 BTG1P62324 171 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 SCGB2A2Q13296 93 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF181Q2M3W8 571 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 KLHL36Q8N4N3 616 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 CELF2-AS1Q8N7Q2 184 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF511Q8NB15 262 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 BHLHE23Q8NDY6 225 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 OR6K6Q8NGW6 343 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 ST7LQ8TDW4 575 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 SLAMF6Q96DU3 332 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 KCNJ15Q99712 375 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 OPA3Q9H6K4 179 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 MARCH7Q9H992 704 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 TMEM100Q9NV29 134 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 PDP1Q9P0J1 537 aaPredicted RBP12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 DNAJB9Q9UBS3 223 aa12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
SMIM11A-203ENST00000399299 H0YL77 283 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 FKBP6O75344 327 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 FOXH1O75593 365 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 FSTL3O95633 263 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 SBK2P0C263 348 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 ANXA8P13928 327 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 PAICSP22234 425 aaKnown RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 CPT2P23786 658 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 MDH2P40926 338 aaKnown RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 CBX1P83916 185 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 ZMYND11Q15326 602 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 KRTAP24-1Q3LI83 254 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 LIPNQ5VXI9 398 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 FAHD2BQ6P2I3 314 aaPredicted RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 MRPL21Q7Z2W9 205 aaKnown RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 MUC20Q8N307 709 aaPredicted RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 IQCF1Q8N6M8 205 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 SLCO4A1Q96BD0 722 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 FAHD2AQ96GK7 314 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 COPS4Q9BT78 406 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 TMPRSS13Q9BYE2 586 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 SLC22A4Q9H015 551 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF556Q9HAH1 456 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 PATZ1Q9HBE1 687 aaKnown RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 METRNQ9UJH8 293 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 PCDHB10Q9UN67 800 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 FBN3Q75N90 2809 aa12.52□□□□□ -0.41
SMIM11A-203ENST00000399299 CD300LBA8K4G0 201 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 F5H5P2 479 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms