RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 C11orf40Q8WZ69 217 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 GSX2Q9BZM3 304 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LRP12Q9Y561 859 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 IGHV1OR15-9A0A0B4J2B8 117 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SSX5O60225 188 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LDOC1O95751 146 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 IGF2P01344 180 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR4E1P0C645 316 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SLC25A1P53007 311 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 HNRNPKP61978 463 aaKnown RBP eCLIP4.43□□□□□ -1.74e-8■■■■■ 26.9
SMAD4-202ENST00000398417 CSNK2A1P68400 391 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 EGR4Q05215 589 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SKP2Q13309 424 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 TGIF2LXQ8IUE1 241 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 CSNK2A3Q8NEV1 391 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR51T1Q8NGJ9 327 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ASB17Q8WXJ9 295 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SLAMF6Q96DU3 332 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR5B2Q96R09 309 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 DHRS9Q9BPW9 319 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 MS4A7Q9GZW8 240 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 MED13Q9UHV7 2174 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 H0YIG0 161 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LY86O95711 162 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 CFIP05156 583 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 JMJD7P0C870 316 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 PI3P19957 117 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 IGLV3-21P80748 117 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 MOGAT2Q3SYC2 334 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 FDX2Q6P4F2 183 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LSMEM1Q8N8F7 131 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 CTHRC1Q96CG8 243 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SLC19A3Q9BZV2 496 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 FSCN3Q9NQT6 498 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 PGPEP1Q9NXJ5 209 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 TAS2R5Q9NYW4 299 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 NTMQ9P121 344 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 TLCD2A6NGC4 264 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR4C45A6NMZ5 311 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF736B4DX44 427 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SMAD7O15105 426 aaKnown RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SNCGO76070 127 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 KNG1P01042 644 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ITGA5P08648 1049 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LUMP51884 338 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 AKR1C2P52895 323 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 HSD11B2P80365 405 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 AKR1C1Q04828 323 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 FHL1Q13642 323 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LRRTM1Q86UE6 522 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR51A2Q8NGJ7 313 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR6M1Q8NGM8 313 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 STT3BQ8TCJ2 826 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 CTSFQ9UBX1 484 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 PIGBOS1A0A0B4J2F0 54 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 TRBV5-5A0A0J9YX44 114 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LOC101059948A0A1B0GTJ6 334 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 WNT11O96014 354 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 GNB3P16520 340 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 AVPR2P30518 371 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SWI5Q1ZZU3 235 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 C2orf68Q2NKX9 166 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF578Q96N58 590 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 EDEM2Q9BV94 578 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 POTEKPQ9BYX7 375 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 RTN4RQ9BZR6 473 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LOC102724200A0A096LPH7 203 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 FAM230AA0A1W2PPH8 454 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 FIGNL2A6NMB9 653 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 CTAG2O75638 210 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 F10P00742 488 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SFTPBP07988 381 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 M6PRP20645 277 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 DAP3P51398 398 aaKnown RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ELFN2Q5R3F8 820 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ADGRG3Q86Y34 549 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 PLXDC1Q8IUK5 500 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 GDF15Q99988 308 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 AIFM2Q9BRQ8 373 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 POFUT1Q9H488 388 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 TAS2R8Q9NYW2 309 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 TAS2R3Q9NYW6 316 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 MRPS17Q9Y2R5 130 aaKnown RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LSM5Q9Y4Y9 91 aaKnown RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ETV7Q9Y603 341 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LAMA1P25391 3075 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 LINC00862A6NCI5 91 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 K7ERU9 68 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 RLN2P04090 185 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ASAH2BP0C7U1 165 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 RNF4P78317 190 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF169Q14929 603 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 CHRFAM7AQ494W8 412 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ANKRD16Q6P6B7 361 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 LINC00114Q6XXX2 140 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF679Q8IYX0 411 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 BATF2Q8N1L9 274 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PRSS35Q8N3Z0 413 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 GVQW1Q8N7I0 195 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms