RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 CCNOP22674 350 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 RSPO1Q2MKA7 263 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 YIF1BQ5BJH7 314 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 FAM57BQ71RH2 274 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 C1orf174Q8IYL3 243 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 PRSS35Q8N3Z0 413 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 CCDC54Q8NEL0 328 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 SLC7A6Q92536 515 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 APOBEC3DQ96AK3 386 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 TMIGD2Q96BF3 282 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 YIPF6Q96EC8 236 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 MS4A3Q96HJ5 214 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 PGLYRP3Q96LB9 341 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 PCNX1Q96RV3 2341 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 C1QTNF5Q9BXJ0 243 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 RGCCQ9H4X1 137 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 BRD7Q9NPI1 651 aa20.45■□□□□ 0.86
TSPAN4-202ENST00000397396 HIVEP3Q5T1R4 2406 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 A0A0U1RQV5 110 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 ICMTO60725 284 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 LCATP04180 440 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 ISG15P05161 165 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 KIR3DL2P43630 455 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 PRSS45Q7RTY3 260 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 GHSRQ92847 366 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 ITFG2Q969R8 447 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 KCNS3Q9BQ31 491 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 BCL7BQ9BQE9 202 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 TBCCD1Q9NVR7 557 aa20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 SIRT4Q9Y6E7 314 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-202ENST00000397396 IGHV1-18A0A0C4DH31 117 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 XRCC2O43543 280 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 ZFPL1O95159 310 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 CECR9P0C854 216 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 ZNF12P17014 697 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 ACHEP22303 614 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 CFL1P23528 166 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 PCSK6P29122 969 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 TGFBR2P37173 567 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 ZNF83P51522 516 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 TFF3Q07654 80 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 TMEM108Q6UXF1 575 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 GDPGP1Q6ZNW5 385 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 COLCA1Q6ZS62 124 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 OR8B12Q8NGG6 310 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 FUNDC2Q9BWH2 189 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 OPA3Q9H6K4 179 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 STUB1Q9UNE7 303 aa20.43■□□□□ 0.86
TSPAN4-202ENST00000397396 M0R1B8 84 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 TBX1O43435 398 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 TTRP02766 147 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 SLC2A1P11166 492 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 TUBG1P23258 451 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 MAPK3P27361 379 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 MALLQ13021 153 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 PAMR1Q6UXH9 720 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 ANKRD13BQ86YJ7 626 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 OR5L1Q8NGL2 311 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 GPR148Q8TDV2 347 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 PDCD1LG2Q9BQ51 273 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 TMED9Q9BVK6 235 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 C1QTNF6Q9BXI9 259 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 TUBG2Q9NRH3 451 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 HHLA2Q9UM44 414 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 SSR3Q9UNL2 185 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 SLC22A13Q9Y226 551 aa20.42■□□□□ 0.86
TSPAN4-202ENST00000397396 DIDO1Q9BTC0 2240 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 A0A1B0GVI7 797 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 RGS9O75916 674 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 CRYAAP02489 173 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 CELA3BP08861 270 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 EPXP11678 715 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 PTAFRP25105 342 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 RPS25P62851 125 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 CDSNQ15517 529 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 GPR107Q5VW38 600 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 SEZ6L2Q6UXD5 910 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 WFDC8Q8IUA0 241 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 CLVS1Q8IUQ0 354 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 ZNF420Q8TAQ5 688 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 PHYHIPQ92561 330 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 AKAP1Q92667 903 aaKnown RBP eCLIP20.41■□□□□ 0.867e-7■■■■□ 20.3
TSPAN4-202ENST00000397396 RALYQ9UKM9 306 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 SF3B6Q9Y3B4 125 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 SPEF1Q9Y4P9 236 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 N6AMT1Q9Y5N5 214 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 CFAP46Q8IYW2 2715 aa20.41■□□□□ 0.86
TSPAN4-202ENST00000397396 TUBAL3A6NHL2 446 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 GATBO75879 557 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 CCL2P13500 99 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 TMBIM6P55061 237 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 NAAAQ02083 359 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 HGFACQ04756 655 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 ALKBH2Q6NS38 261 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 CD200R1LQ6Q8B3 271 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 DOK3Q7L591 496 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 COMMD2Q86X83 199 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 RAB2BQ8WUD1 216 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 DACH2Q96NX9 599 aa20.4■□□□□ 0.86
TSPAN4-202ENST00000397396 WFIKKN1Q96NZ8 548 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms