RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LSM6P62312 80 aaKnown RBP7.73□□□□□ -1.17
NEDD9-203ENST00000397378 ARF6P62330 175 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 ANKDD1AQ495B1 522 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 CCDC92Q53HC0 331 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-203ENST00000397378 HSP90B2PQ58FF3 399 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 C11orf88Q6PI97 169 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 METAP1DQ6UB28 335 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-203ENST00000397378 CCDC80Q76M96 950 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 RNF144BQ7Z419 303 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 BHLHE23Q8NDY6 225 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 C19orf18Q8NEA5 215 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 DMRTB1Q96MA1 342 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 ECSITQ9BQ95 431 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 PPA2Q9H2U2 334 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 MMADHCQ9H3L0 296 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-203ENST00000397378 KAT8Q9H7Z6 458 aaKnown RBP7.73□□□□□ -1.17
NEDD9-203ENST00000397378 SMURF1Q9HCE7 757 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 TRIM36Q9NQ86 728 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 RNF7Q9UBF6 113 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 NKX1-2Q9UD57 310 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-203ENST00000397378 KPTNQ9Y664 436 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 TRAV38-1A0A0B4J264 116 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 TEX13CA0A0J9YWL9 993 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 A0A1B0GVI7 797 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 TMEM120BA0PK00 339 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 ELOVL7A1L3X0 281 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 POLR3GO15318 223 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-203ENST00000397378 ADAM20O43506 726 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 PTBP3O95758 552 aaKnown RBP7.72□□□□□ -1.17
NEDD9-203ENST00000397378 HLA-DPB1P04440 258 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 DBHP09172 617 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 EFNB2P52799 333 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 SLC18A1P54219 525 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 PIN1Q13526 163 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-203ENST00000397378 DCTN2Q13561 401 aaKnown RBP7.72□□□□□ -1.17
NEDD9-203ENST00000397378 FHL1Q13642 323 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 SELPLGQ14242 412 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 MPPED2Q15777 294 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 CDONQ4KMG0 1287 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 AGKQ53H12 422 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 COLCA1Q6ZS62 124 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 DPP10Q8N608 796 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 SPERTQ8NA61 448 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 FAM156AQ8NDB6 213 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 OR5R1Q8NH85 324 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 BPIFA2Q96DR5 249 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 RBMXL1Q96E39 390 aaKnown RBP7.72□□□□□ -1.17
NEDD9-203ENST00000397378 ZNF583Q96ND8 569 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 CGREF1Q99674 301 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 HCAR1Q9BXC0 346 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 SH3GLB1Q9Y371 365 aa7.72□□□□□ -1.17
NEDD9-203ENST00000397378 HYDINQ4G0P3 5121 aa7.71□□□□□ -1.17
NEDD9-203ENST00000397378 PRSS37A4D1T9 235 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 H7C1C5 153 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 RER1O15258 196 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 OR10H3O60404 316 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 FBXO24O75426 580 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 FCN3O75636 299 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 IFI30P13284 250 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 CTLA4P16410 223 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 RPL4P36578 427 aaKnown RBP7.71□□□□□ -1.18
NEDD9-203ENST00000397378 KIR2DS4P43632 304 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 MTPNP58546 118 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 LCN6P62502 163 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 HIST1H3AP68431 136 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 GUCA2AQ02747 115 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 VMACQ2NL98 169 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 HIST2H3PS2Q5TEC6 136 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 PRAMEF6Q5VXH4 476 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 SFRP4Q6FHJ7 346 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-203ENST00000397378 WDR93Q6P2C0 686 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 HIST2H3AQ71DI3 136 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 BTN2A1Q7KYR7 527 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 VMO1Q7Z5L0 202 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 DHDDSQ86SQ9 333 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 CROCCP2Q86T23 111 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 PDZD9Q8IXQ8 264 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 PLPP7Q8NBV4 271 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 OR51A7Q8NH64 312 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 OR2T6Q8NHC8 308 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 COQ7Q99807 217 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 CCDC28BQ9BUN5 200 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 HDHD2Q9H0R4 259 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 UFSP2Q9NUQ7 469 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 KAAG1Q9UBP8 84 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 GRHPRQ9UBQ7 328 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 RPUSD1Q9UJJ7 312 aaKnown RBP7.71□□□□□ -1.18
NEDD9-203ENST00000397378 BAG5Q9UL15 447 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 NOP16Q9Y3C1 178 aaKnown RBP7.71□□□□□ -1.18
NEDD9-203ENST00000397378 DNAH1Q9P2D7 4330 aa7.71□□□□□ -1.18
NEDD9-203ENST00000397378 TRAV27A0A087WT01 109 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 RBMY1BA6NDE4 496 aaKnown RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 RBMY1EA6NEQ0 496 aaKnown RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 OOEPA6NGQ2 149 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 XKRYO14609 159 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 DVL1O14640 695 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 CD14P08571 375 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 RBMY1DP0C7P1 496 aaKnown RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 LYL1P12980 280 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 TNFRSF1BP20333 461 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms