RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GKN2Q86XP6 184 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 JAGN1Q8N5M9 183 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ZNF321PQ8N8H1 164 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ACBD4Q8NC06 268 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 SEC11CQ9BY50 192 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 MMP26Q9NRE1 261 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 OR52A1Q9UKL2 312 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 TMEM184BQ9Y519 407 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 SPTBP11277 2137 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CCDC163A0A0D9SF12 145 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 B4DGG1 531 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ICOSLGO75144 302 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 PLGP00747 810 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 IGKV3-11P04433 115 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CSN2P05814 226 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 PVALBP20472 110 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 PNLIPRP2P54317 469 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 HNRNPKP61978 463 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 S100A12P80511 92 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CYCSP99999 105 aaKnown RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 GLO1Q04760 184 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 UNC119Q13432 240 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 HYAL4Q2M3T9 481 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 TMEM88Q6PEY1 159 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 UNQ6126/PRO20091Q6UXV3 157 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 RHOUQ7L0Q8 258 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 C17orf82Q86X59 251 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 HOGA1Q86XE5 327 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ADAD2Q8NCV1 583 aaKnown RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ST7LQ8TDW4 575 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ZC3H10Q96K80 434 aaKnown RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ESRP2Q9H6T0 727 aaKnown RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 EMC9Q9Y3B6 208 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CSAG2Q9Y5P2 127 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CABIN1Q9Y6J0 2220 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 NCOR1O75376 2440 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 A0A0B4J2A0 478 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 PCP4L1A6NKN8 68 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 ALG1L2C9J202 215 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 LMO7DNF2Z398 122 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 H0YIG0 161 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 PLPP3O14495 311 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 BPNT1O95861 308 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 HRH1P35367 487 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 CSNK1EP49674 416 aaKnown RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 TAS2R31P59538 309 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 MST1LQ2TV78 715 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 TMEM71Q6P5X7 295 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 GVQW1Q8N7I0 195 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 LMX1AQ8TE12 382 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 TCTN2Q96GX1 697 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 ADOQ96SZ5 270 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 UQCC2Q9BRT2 126 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 IFT22Q9H7X7 185 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 ACKR4Q9NPB9 350 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 LANCL2Q9NS86 450 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 SHPKQ9UHJ6 478 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 OR6C76A6NM76 312 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 F8W036 122 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 BCAT2O15382 392 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 HCRTR2O43614 444 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 LMX1BO60663 402 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 SNAPINO95295 136 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 WISP1O95388 367 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 PGCP20142 388 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 MMP16P51512 607 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 AFF3P51826 1226 aaKnown RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 BLOC1S1P78537 153 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 PLEKHN1Q494U1 663 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 SLC22A6Q4U2R8 563 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 OR52W1Q6IF63 320 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 ZNF529Q6P280 563 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 CBLN2Q8IUK8 224 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 SLC26A10Q8NG04 563 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 OR1M1Q8NGA1 313 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 MMABQ96EY8 250 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 CNTNAP3BQ96NU0 1288 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 BIN3Q9NQY0 253 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 MYEF2Q9P2K5 600 aaKnown RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 ATPIF1Q9UII2 106 aa11.87□□□□□ -0.51
TRIM40-207ENST00000396581 COA3Q9Y2R0 106 aaPredicted RBP11.87□□□□□ -0.51
TRIM40-207ENST00000396581 TMEM131Q92545 1883 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 EEF1E1-BLOC1S5C9J1V9 151 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 H0YIZ8 118 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 SSX5O60225 188 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 TSPAN2O60636 221 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 SERPINF1P36955 418 aa11.86□□□□□ -0.51
TRIM40-207ENST00000396581 POLR2HP52434 150 aaKnown RBP11.86□□□□□ -0.51
TRIM40-207ENST00000396581 AKR1C2P52895 323 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms