RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CA10Q9NS85 328 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 VCANP13611 3396 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 UBE2QL1A1L167 161 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 RAB27BO00194 218 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 RER1O15258 196 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 DNPH1O43598 174 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 SNAPC5O75971 98 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 RAB3DO95716 219 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 ZNF20P17024 532 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 GSK3AP49840 483 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 PRKXP51817 358 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 SUCLG1P53597 346 aaKnown RBP14.84□□□□□ -0.03
NUP50-202ENST00000396096 UNC119Q13432 240 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 ZNF260Q3ZCT1 412 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 DCAF12Q5T6F0 453 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 PGAP1Q75T13 922 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 TMEM123Q8N131 208 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 FAM46BQ96A09 425 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 PIGQQ9BRB3 760 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 MYOZ1Q9NP98 299 aaPredicted RBP14.84□□□□□ -0.03
NUP50-202ENST00000396096 UPB1Q9UBR1 384 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 A0A0C4DFX4 3053 aa14.84□□□□□ -0.03
NUP50-202ENST00000396096 STK17BO94768 372 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 ICAM2P13598 275 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 MSR1P21757 451 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 CX3CR1P49238 355 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 GNG2P59768 71 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 HIST1H3AP68431 136 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 EIF3IQ13347 325 aaKnown RBP14.83□□□□□ -0.04
NUP50-202ENST00000396096 HIST2H3PS2Q5TEC6 136 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 TEX261Q6UWH6 196 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 HIST2H3AQ71DI3 136 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 OR9K2Q8NGE7 335 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 OR13C9Q8NGT0 318 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 DVL3Q92997 716 aaPredicted RBP14.83□□□□□ -0.04
NUP50-202ENST00000396096 INTS12Q96CB8 462 aaKnown RBP14.83□□□□□ -0.04
NUP50-202ENST00000396096 SLC25A21Q9BQT8 299 aaPredicted RBP14.83□□□□□ -0.04
NUP50-202ENST00000396096 ZNF416Q9BWM5 594 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 TMPRSS13Q9BYE2 586 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 NELFAQ9H3P2 528 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 U3KQ87 197 aa14.83□□□□□ -0.04
NUP50-202ENST00000396096 WIPF3A6NGB9 483 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 GJE1A6NN92 205 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 TMEM14DPA8MWL7 114 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ZNF735P0CB33 412 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 VSIG8P0DPA2 414 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 RIPPLY1Q0D2K3 151 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ZNF468Q5VIY5 522 aaPredicted RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 H3F3CQ6NXT2 135 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 DOK3Q7L591 496 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 OR2W3Q7Z3T1 314 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ABHD12BQ7Z5M8 362 aaPredicted RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 OR5AS1Q8N127 324 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 OR8H1Q8NGG4 311 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 OR8S1Q8NH09 359 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 GPR84Q9NQS5 396 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 B3GNT2Q9NY97 397 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ZNF319Q9P2F9 582 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 EIF3KQ9UBQ5 218 aaKnown RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 KLK13Q9UKR3 277 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 TCFL5Q9UL49 500 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 PADI1Q9ULC6 663 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 A0A0J9YW62 118 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 NPIPA2E9PIF3 369 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 NPIPA3F8WFD2 350 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 CYB5AP00167 134 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 HPP00738 406 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 IGLV3-1P01715 115 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 RLN1P04808 185 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 MPZP25189 248 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 SRD5A2P31213 254 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ZNF93P35789 620 aaPredicted RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 B3GALT5-AS1P59052 145 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ENDOGQ14249 297 aaKnown RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 PHYHD1Q5SRE7 291 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 GALNT16Q8N428 558 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 UXS1Q8NBZ7 420 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ACBD4Q8NC06 268 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 OR52B4Q8NGK2 314 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 NABP1Q96AH0 204 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ZNF385AQ96PM9 386 aaKnown RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 GAL3ST1Q99999 423 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 ZPBPQ9BS86 351 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 EDEM2Q9BV94 578 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 B3GNT4Q9C0J1 378 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 MYEF2Q9P2K5 600 aaKnown RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 FOXD3Q9UJU5 478 aaPredicted RBP14.82□□□□□ -0.04
NUP50-202ENST00000396096 LOXL2Q9Y4K0 774 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 TECTAO75443 2155 aa14.82□□□□□ -0.04
NUP50-202ENST00000396096 TMEM235A6NFC5 223 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 ZNF736B4DX44 427 aaPredicted RBP14.81□□□□□ -0.04
NUP50-202ENST00000396096 G3V3Y1 287 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 TSC22D2O75157 780 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 GUCA1AP43080 201 aaPredicted RBP14.81□□□□□ -0.04
NUP50-202ENST00000396096 Q0VFX4 171 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 MPPED2Q15777 294 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 SGCAQ16586 387 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 ZNF283Q8N7M2 679 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 ZIC4Q8N9L1 334 aa14.81□□□□□ -0.04
NUP50-202ENST00000396096 ZNF680Q8NEM1 530 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms