RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 DLL4Q9NR61 685 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 LOC102725191A0A1B0GVB3 256 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 MEIS3P1A6NDR6 274 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 SMAD9O15198 467 aaKnown RBP12.36□□□□□ -0.43
SNCA-204ENST00000394989 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 FOLR3P41439 243 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 DNASE1L1P49184 302 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 MLF1P58340 268 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 Q0VFX4 171 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 PCGF3Q3KNV8 242 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 DBX2Q6ZNG2 339 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 Q6ZTK2 550 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 RPS19BP1Q86WX3 136 aaKnown RBP12.36□□□□□ -0.43
SNCA-204ENST00000394989 SLC17A5Q9NRA2 495 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 ARPC1BO15143 372 aaKnown RBP12.36□□□□□ -0.43
SNCA-204ENST00000394989 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 QDPRP09417 244 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 OPCMLQ14982 345 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 FGD2Q7Z6J4 655 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 ARMC10Q8N2F6 343 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 OR4D6Q8NGJ1 314 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 FGGYQ96C11 551 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 ADAT3Q96EY9 351 aaPredicted RBP12.36□□□□□ -0.43
SNCA-204ENST00000394989 SEC22CQ9BRL7 303 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 ATG5Q9H1Y0 275 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 NOX3Q9HBY0 568 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 PNRC2Q9NPJ4 139 aaKnown RBP12.36□□□□□ -0.43
SNCA-204ENST00000394989 MYEF2Q9P2K5 600 aaKnown RBP12.36□□□□□ -0.43
SNCA-204ENST00000394989 ASH2LQ9UBL3 628 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 CDV3Q9UKY7 258 aaKnown RBP12.36□□□□□ -0.43
SNCA-204ENST00000394989 KCNMB2Q9Y691 235 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 A0A087WZY1 265 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 hCG_1807616A0A1W2PRN6 198 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 OR2M5A3KFT3 312 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 RBBP9O75884 186 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 STK17BO94768 372 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 PMS2P2O95744 297 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 OR10K2Q6IF99 312 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 SLC25A25Q6KCM7 469 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 ZNF813Q6ZN06 617 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 OR52H1Q8NGJ2 320 aa12.36□□□□□ -0.43
SNCA-204ENST00000394989 IGHV3-15A0A0B4J1V0 119 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 B4E171 279 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 RER1O15258 196 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 LPLP06858 475 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 FKBP2P26885 142 aaKnown RBP12.35□□□□□ -0.43
SNCA-204ENST00000394989 TSPAN7P41732 249 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 RAD52P43351 418 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 DSCR4P56555 118 aaPredicted RBP12.35□□□□□ -0.43
SNCA-204ENST00000394989 CLDN6P56747 220 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 SLC35A1P78382 337 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 CSRP2Q16527 193 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 TIPARPQ7Z3E1 657 aaKnown RBP12.35□□□□□ -0.43
SNCA-204ENST00000394989 PPP1R32Q7Z5V6 425 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 JAGN1Q8N5M9 183 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 TMEM156Q8N614 296 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 OR4C16Q8NGL9 310 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 JSRP1Q96MG2 331 aaPredicted RBP12.35□□□□□ -0.43
SNCA-204ENST00000394989 GAL3ST1Q99999 423 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 A0A0G2JMM0 328 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 A0A1W2PPB8 328 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 A0A1W2PRS3 328 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 KIR3DP1A8MWS1 328 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 L7N2F9 121 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 TGM6O95932 706 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 CLDN17P56750 224 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 UBE2MP61081 183 aaKnown RBP12.35□□□□□ -0.43
SNCA-204ENST00000394989 MOGAT2Q3SYC2 334 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 PHYHD1Q5SRE7 291 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 RAET1LQ5VY80 246 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 OR1J2Q8NGS2 313 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 UCN2Q96RP3 112 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 SOX7Q9BT81 388 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 ZNF319Q9P2F9 582 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 NCKAP5O14513 1909 aa12.35□□□□□ -0.43
SNCA-204ENST00000394989 MEIKINA0A087WXM9 373 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 A0A1B0GTI1 187 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 ARPC5O15511 151 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 NDUFB6O95139 128 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 GABRA1P14867 456 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 HYAL4Q2M3T9 481 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 NLRC3Q7RTR2 1065 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 RHBDD1Q8TEB9 315 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 UTP23Q9BRU9 249 aaKnown RBP12.34□□□□□ -0.43
SNCA-204ENST00000394989 HPF1Q9NWY4 346 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 FBXO4Q9UKT5 387 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 A0A1B0GUH1 482 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 ZNF878C9JN71 531 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
SNCA-204ENST00000394989 GABREP78334 506 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 ZNF273Q14593 569 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 TOMM20Q15388 145 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 KLHL24Q6TFL4 600 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 C3P1Q6ZMU1 363 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 ADGRE4PQ86SQ3 457 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 RELL2Q8NC24 303 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms