RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 WDPCPO95876 746 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 AKR1C3P42330 323 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 TAS2R31P59538 309 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 FUT7Q11130 342 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 STPG1Q5TH74 334 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 BATF2Q8N1L9 274 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 NKAIN3Q8N8D7 197 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 OR4D6Q8NGJ1 314 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 C8orf44Q96CB5 159 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 CRB3Q9BUF7 120 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 RGCCQ9H4X1 137 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 GPR84Q9NQS5 396 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 PARPBPQ9NWS1 579 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 ZNF629Q9UEG4 869 aaPredicted RBP14.47□□□□□ -0.09
PCDH1-203ENST00000394536 ADAP1O75689 374 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 TSPAN15O95858 294 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 SNRNP70P08621 437 aaKnown RBP14.47□□□□□ -0.09
PCDH1-203ENST00000394536 ZNF14P17017 642 aaPredicted RBP14.47□□□□□ -0.09
PCDH1-203ENST00000394536 TMEM200AQ86VY9 491 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 SLC22A18ASQ8N1D0 253 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 CTSFQ9UBX1 484 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 NPIPA2E9PIF3 369 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 NPIPA3F8WFD2 350 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 IGHG1P01857 330 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 LINC00271P0C7V0 271 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 SLC37A1P57057 533 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 INSM1Q01101 510 aaPredicted RBP14.46□□□□□ -0.09
PCDH1-203ENST00000394536 C17orf67Q0P5P2 114 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 FAM189A2Q15884 450 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 IAH1Q2TAA2 248 aaPredicted RBP14.46□□□□□ -0.09
PCDH1-203ENST00000394536 BAP18Q8IXM2 172 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 CLEC1AQ8NC01 280 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 KCNG3Q8TAE7 436 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
PCDH1-203ENST00000394536 PTPMT1Q8WUK0 201 aaPredicted RBP14.46□□□□□ -0.09
PCDH1-203ENST00000394536 CCNL2Q96S94 520 aaPredicted RBP14.46□□□□□ -0.09
PCDH1-203ENST00000394536 CFHR5Q9BXR6 569 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 MMACHCQ9Y4U1 282 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 PLXNB3Q9ULL4 1909 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 BCL2L11O43521 198 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 CBR1P16152 277 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 EGR4Q05215 589 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 GPX8Q8TED1 209 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 C11orf40Q8WZ69 217 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 ZNF426Q9BUY5 554 aa14.46□□□□□ -0.09
PCDH1-203ENST00000394536 TPRP12270 2363 aaKnown RBP14.46□□□□□ -0.1
PCDH1-203ENST00000394536 METTL12A8MUP2 240 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 AQP8O94778 261 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 ATG12O94817 140 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 ASAH2BP0C7U1 165 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 FCGR2AP12318 317 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 PLEKHN1Q494U1 663 aaPredicted RBP14.46□□□□□ -0.1
PCDH1-203ENST00000394536 OR6K3Q8NGY3 331 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 FNDC9Q8TBE3 224 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 WWTR1Q9GZV5 400 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 PBOV1Q9GZY1 135 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 KLHL13Q9P2N7 655 aa14.46□□□□□ -0.1
PCDH1-203ENST00000394536 FRG2CA6NGY1 282 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 STMND1H3BQB6 276 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 SNAPINO95295 136 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 F12P00748 615 aaPredicted RBP14.45□□□□□ -0.1
PCDH1-203ENST00000394536 CD80P33681 288 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 HYAL1Q12794 435 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 LPCAT3Q6P1A2 487 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 SULF2Q8IWU5 870 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 SGPP2Q8IWX5 399 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 KCNRGQ8N5I3 272 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 CLRN3Q8NCR9 226 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 GDF2Q9UK05 429 aaPredicted RBP14.45□□□□□ -0.1
PCDH1-203ENST00000394536 FAM96BQ9Y3D0 163 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 CCDC85CA6NKD9 419 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 HOXD4P09016 255 aaPredicted RBP14.45□□□□□ -0.1
PCDH1-203ENST00000394536 CBX5P45973 191 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 GABREP78334 506 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 MEX3BQ6ZN04 569 aaKnown RBP14.45□□□□□ -0.1
PCDH1-203ENST00000394536 OR5M8Q8NGP6 311 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 KLHDC3Q9BQ90 382 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 C20orf24Q9BUV8 137 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 NMNAT2Q9BZQ4 307 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 TMEM184BQ9Y519 407 aaPredicted RBP14.45□□□□□ -0.1
PCDH1-203ENST00000394536 A0A1W2PPC4 97 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 MFSD2BA6NFX1 497 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 TRAPPC6AO75865 159 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 OR2A4O95047 310 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 RPA2P15927 270 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 PDZK1IP1Q13113 114 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 PEA15Q15121 130 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 ATRAIDQ6UW56 229 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 OR2A7Q96R45 310 aa14.45□□□□□ -0.1
PCDH1-203ENST00000394536 TRBV5-5A0A0J9YX44 114 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 FAM74A7A6NL05 159 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 SULT1C2O00338 296 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 CAMLGP49069 296 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 CLDN17P56750 224 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 RSU1Q15404 277 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 ISXQ2M1V0 245 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 FAM74A3Q4VXF1 159 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 EXOSC6Q5RKV6 272 aaKnown RBP14.44□□□□□ -0.1
PCDH1-203ENST00000394536 MFSD8Q8NHS3 518 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 STT3BQ8TCJ2 826 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms