RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PPP1R2P9O14990 202 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 KCTD9Q7L273 389 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 MAMDC2Q7Z304 686 aaPredicted RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 NPEPL1Q8NDH3 523 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 TMEM106AQ96A25 262 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 BMFQ96LC9 184 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 MOGAT1Q96PD6 335 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 COMMD4Q9H0A8 199 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 RAB18Q9NP72 206 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 H0Y8X5 98 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 H0YGG7 62 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 H7C1Q1 480 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 OR2C1O95371 312 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 CRYABP02511 175 aaKnown RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 ARF3P61204 181 aaPredicted RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 MESTQ5EB52 335 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 RNASE10Q5GAN6 216 aaKnown RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 ZNF584Q8IVC4 421 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 ZNRF4Q8WWF5 429 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 GAS2L1Q99501 681 aaPredicted RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 OR5H15A6NDH6 313 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 OR5H1A6NKK0 313 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 PEX12O00623 359 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 FGF17O60258 216 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 LDB3O75112 727 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 KLF8O95600 359 aaPredicted RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 PTBP3O95758 552 aaKnown RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 F13BP05160 661 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 RPS10P46783 165 aaKnown RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 SKP1P63208 163 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 GPR18Q14330 331 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 TOMM34Q15785 309 aaPredicted RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 M1APQ8TC57 530 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 MUCL1Q96DR8 90 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 RAB33BQ9H082 229 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 PTGES2Q9H7Z7 377 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 TMEM74BQ9NUR3 256 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 MRM2Q9UI43 246 aaKnown RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 KLK13Q9UKR3 277 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 FARSAQ9Y285 508 aaKnown RBP16.9■□□□□ 0.3
HOXC6-202ENST00000394331 TMED7Q9Y3B3 224 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 ENTPD2Q9Y5L3 495 aa16.9■□□□□ 0.3
HOXC6-202ENST00000394331 A0A087WV48 116 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 A8MWP6 167 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 UMAD1C9J7I0 102 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 HNRNPA2B1P22626 353 aaKnown RBP16.89■□□□□ 0.29
HOXC6-202ENST00000394331 GUK1Q16774 197 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 SLC16A9Q7RTY1 509 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 PPP1R3BQ86XI6 285 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 TGM7Q96PF1 710 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 OR2S2Q9NQN1 319 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 RXFP3Q9NSD7 469 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 SCN3AQ9NY46 2000 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 C13orf42A0A1B0GVH6 325 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 PMP2P02689 132 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 CD37P11049 281 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF28P17035 718 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 FAM3AP98173 230 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 OR8G1Q15617 311 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 KHDC3LQ587J8 217 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 PDE7BQ9NP56 450 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 FBXO34Q9NWN3 711 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 WASF3Q9UPY6 502 aa16.89■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF726A6NNF4 738 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 ARPC3O15145 178 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 STK17BO94768 372 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 TSPAN15O95858 294 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 ERCC1P07992 297 aaPredicted RBP16.88■□□□□ 0.29
HOXC6-202ENST00000394331 LIPCP11150 499 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 CRABP1P29762 137 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 CLINT1Q14677 625 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 PRICKLE4Q2TBC4 344 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 LINC01590Q5TEZ4 76 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 OR2A2Q6IF42 318 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 DOK4Q8TEW6 326 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 SMDT1Q9H4I9 107 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 MRPS2Q9Y399 296 aaKnown RBP16.88■□□□□ 0.29
HOXC6-202ENST00000394331 IER3IP1Q9Y5U9 82 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 TICRRQ7Z2Z1 1910 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 A0A0B4J2E0 115 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 A0A1B0GW64 132 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 A0A1B0GX12 115 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 FAM221BA6H8Z2 402 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 CYR61O00622 381 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 BRINP1O60477 761 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 GABRA3P34903 492 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 PPM1FP49593 454 aaPredicted RBP16.88■□□□□ 0.29
HOXC6-202ENST00000394331 RASGEF1BQ0VAM2 473 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 RPL7L1Q6DKI1 246 aaKnown RBP16.88■□□□□ 0.29
HOXC6-202ENST00000394331 TMEM184AQ6ZMB5 413 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 DPY19L2P2Q6ZN68 376 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 BAHD1Q8TBE0 780 aaPredicted RBP16.88■□□□□ 0.29
HOXC6-202ENST00000394331 FAM3CQ92520 227 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 MR1Q95460 341 aa16.88■□□□□ 0.29
HOXC6-202ENST00000394331 WSB2Q9NYS7 404 aaPredicted RBP16.88■□□□□ 0.29
HOXC6-202ENST00000394331 DOCK8Q8NF50 2099 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 NPIPA5A0A0B4J1W7 369 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 NPIPA7E9PJI5 369 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms