RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CORTO00230 105 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 TBPL2Q6SJ96 375 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 GLIPR1L1Q6UWM5 242 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 STARD4Q96DR4 205 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 NEIL1Q96FI4 390 aaPredicted RBP12.3□□□□□ -0.44
USP49-203ENST00000394253 MRAP2Q96G30 205 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 SGK494Q96LW2 274 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 DUSP23Q9BVJ7 150 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 SLC5A10A0PJK1 596 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 EFSO43281 561 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 SLC10A3P09131 477 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 Q6ZNX1 250 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 NPY6RQ99463 290 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 DOK5Q9P104 306 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 CTSAP10619 480 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 CD82P27701 267 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 OR8G1Q15617 311 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 OR2G6Q5TZ20 316 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 OR5AU1Q8NGC0 362 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 RTL8AQ9BWD3 113 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 CPMP14384 443 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 PSAPL1Q6NUJ1 521 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 OR4F17Q8NGA8 305 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 SCMH1Q96GD3 660 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 FGFBP2Q9BYJ0 223 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 UFC1Q9Y3C8 167 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 A0A1W2PP55 124 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 HSPB2A8KAH6 182 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 RRADP55042 308 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 HSPB2Q16082 182 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 MANEAQ5SRI9 462 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 SEBOXQ9HB31 216 aaPredicted RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 DNAL4O96015 105 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 NRASP01111 189 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 HRASP01112 189 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 KRASP01116 189 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ALDOCP09972 364 aaKnown RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 PRAMEF20Q5VT98 475 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ISCA2Q86U28 154 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 TMEM102Q8N9M5 508 aaPredicted RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 ANKLE1Q8NAG6 615 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 OR51F2Q8NH61 342 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 GOT1L1Q8NHS2 421 aaPredicted RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 ADAT3Q96EY9 351 aaPredicted RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 NTMT1Q9BV86 223 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 CLDND1Q9NY35 253 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 SIGLEC6O43699 453 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 MT-ATP6P00846 226 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 GUSBP08236 651 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 SIGIRRQ6IA17 410 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 CMTM4Q8IZR5 234 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 C17orf78Q8N4C9 275 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 MYOZ3Q8TDC0 251 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 GALMQ96C23 342 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 PKIBQ9C010 78 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ZFP30Q9Y2G7 519 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 CDRT15L2A8MXV6 281 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 HMGN2P05204 90 aaKnown RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 ELAVL4P26378 380 aaKnown RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 HRH1P35367 487 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ACAA2P42765 397 aaKnown RBP12.29□□□□□ -0.44
USP49-203ENST00000394253 FAM189BP81408 668 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ZNF385BQ569K4 471 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 C9orf152Q5JTZ5 239 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 OR2G2Q8NGZ5 317 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 NAA60Q9H7X0 242 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ACTL6AO96019 429 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 CTSLP07711 333 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 FAM3AP98173 230 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 MCHR2Q969V1 340 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ACPTQ9BZG2 426 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ZNF785A8K8V0 405 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 ZNF217O75362 1048 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 GASTP01350 101 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 F13BP05160 661 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 METAP1P53582 386 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 TCEAL1Q15170 157 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 DOK3Q7L591 496 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 LYG2Q86SG7 212 aa12.29□□□□□ -0.44
USP49-203ENST00000394253 PRAMEF26H0Y7S4 382 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 LEFTY2O00292 366 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 RRP8O43159 456 aaKnown RBP12.28□□□□□ -0.44
USP49-203ENST00000394253 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 NRG4Q8WWG1 115 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 IL22RA2Q969J5 263 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 ZNF2Q9BSG1 426 aaPredicted RBP12.28□□□□□ -0.44
USP49-203ENST00000394253 MED20Q9H944 212 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 INSL5Q9Y5Q6 135 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 WNT6Q9Y6F9 365 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 CNOT1A5YKK6 2376 aaKnown RBP12.28□□□□□ -0.44
USP49-203ENST00000394253 ISLRO14498 428 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 TNFRSF10CO14798 259 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 CLDN20P56880 219 aa12.28□□□□□ -0.44
USP49-203ENST00000394253 GAB4Q2WGN9 574 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms