RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 THRSPQ92748 146 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 THAP7Q9BT49 309 aaPredicted RBP16.7■□□□□ 0.26
CLDND1-203ENST00000394181 TNRC6AQ8NDV7 1962 aaKnown RBP16.7■□□□□ 0.26
CLDND1-203ENST00000394181 CST2P09228 141 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 CALCBP10092 127 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 CPN1P15169 458 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 GNALP38405 381 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 HGFACQ04756 655 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 CARTPTQ16568 116 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 DMRTC1Q5HYR2 192 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 SFRP5Q5T4F7 317 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 FAM166AQ6J272 317 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 CHMP1BQ7LBR1 199 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 GLCCI1Q86VQ1 547 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 LYZL4Q96KX0 146 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 BCO1Q9HAY6 547 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 TRAV17A0A0B4J275 112 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 A0A1B0GVI7 797 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 YES1P07947 543 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 PTHLHP12272 177 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 DGCR2P98153 550 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 GLYATL3Q5SZD4 288 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 C19orf18Q8NEA5 215 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 TRIM63Q969Q1 353 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 SLC25A28Q96A46 364 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 HDHD2Q9H0R4 259 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 MOB1AQ9H8S9 216 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 PAQR5Q9NXK6 330 aaPredicted RBP16.69■□□□□ 0.26
CLDND1-203ENST00000394181 EMC3Q9P0I2 261 aa16.69■□□□□ 0.26
CLDND1-203ENST00000394181 MYEF2Q9P2K5 600 aaKnown RBP16.69■□□□□ 0.26
CLDND1-203ENST00000394181 K7EM74 188 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 SGCEO43556 437 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 SYNGR3O43761 229 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 PDGFAP04085 211 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 CD3GP09693 182 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 SRP9P49458 86 aaKnown RBP16.68■□□□□ 0.26
CLDND1-203ENST00000394181 ARF1P84077 181 aaKnown RBP16.68■□□□□ 0.26
CLDND1-203ENST00000394181 PSG4Q00888 419 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 C2orf76Q3KRA6 126 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 PYHIN1Q6K0P9 492 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 ZNF813Q6ZN06 617 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 PGAM5Q96HS1 289 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 MMP28Q9H239 520 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 A0A096LPE4 126 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 A0A1W2PPZ6 126 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 SLC17A2O00624 439 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 UBL3O95164 117 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 OTX1P32242 354 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-203ENST00000394181 POU3F4P49335 361 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 CD300CQ08708 224 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 RAB11BQ15907 218 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 FAM3DQ96BQ1 224 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 TAAR6Q96RI8 345 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 SLC17A5Q9NRA2 495 aa16.68■□□□□ 0.26
CLDND1-203ENST00000394181 ZNF724A8MTY0 619 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 M0R135 149 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 CDK2P24941 298 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 SNAI3Q3KNW1 292 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 SLC16A14Q7RTX9 510 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 LYPD6Q86Y78 171 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 JAGN1Q8N5M9 183 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 OR52N4Q8NGI2 321 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 OR13C9Q8NGT0 318 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 ZNF799Q96GE5 643 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 SCNM1Q9BWG6 230 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 WNT5BQ9H1J7 359 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 ABCG5Q9H222 651 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 C12orf49Q9H741 205 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 PARPBPQ9NWS1 579 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 RHBDD3Q9Y3P4 386 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 BSNQ9UPA5 3926 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 IGHG3P01860 377 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 CD37P11049 281 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 CRYGSP22914 178 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 DDOSTP39656 456 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 KIR2DL3P43628 341 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 PTH2RP49190 550 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 ART1P52961 327 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 ZNF57Q68EA5 555 aaPredicted RBP16.67■□□□□ 0.26
CLDND1-203ENST00000394181 OR1F12Q8NHA8 337 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 YIPF5Q969M3 257 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 RFT1Q96AA3 541 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 CMTM3Q96MX0 182 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 LINC00470Q9BZP3 86 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 AUNIPQ9H7T9 357 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 ZNF224Q9NZL3 707 aa16.67■□□□□ 0.26
CLDND1-203ENST00000394181 DSPP15924 2871 aaKnown RBP16.66■□□□□ 0.26
CLDND1-203ENST00000394181 ANKRD11Q6UB99 2663 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-203ENST00000394181 ARPC4-TTLL3A0A0A6YYG9 625 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 SLC22A20A6NK97 555 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 GFRA3O60609 400 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 CFPP27918 469 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 RAB35Q15286 201 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 RNPS1Q15287 305 aaKnown RBP16.66■□□□□ 0.26
CLDND1-203ENST00000394181 GLT8D1Q68CQ7 371 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 MCEMP1Q8IX19 187 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 OR1M1Q8NGA1 313 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 OR4D6Q8NGJ1 314 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 APH1AQ96BI3 265 aa16.66■□□□□ 0.26
CLDND1-203ENST00000394181 SPACA5Q96QH8 159 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms