RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZMAT1Q5H9K5 638 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 TMEM255AQ5JRV8 349 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 KCTD18Q6PI47 426 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 GALNT4Q8N4A0 578 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 RFKQ969G6 155 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 DIRC2Q96SL1 478 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 REG4Q9BYZ8 158 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 C8orf4Q9NR00 106 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 DLL4Q9NR61 685 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 N6AMT1Q9Y5N5 214 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 FLNAP21333 2647 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 CHD3Q12873 2000 aaKnown RBP16.21■□□□□ 0.18
PDLIM7-204ENST00000393546 IGHV4-30-2A0A087WSY4 118 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 NDUFS8O00217 210 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 TPD52L2O43399 206 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 SPRY3O43610 288 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 HPXP02790 462 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 SELEP16581 610 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 HTR1FP30939 366 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 MAGEB1P43366 347 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 CX3CR1P49238 355 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 TMED1Q13445 227 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 LRRC36Q1X8D7 754 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 OR2T2Q6IF00 324 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 KRT77Q7Z794 578 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 CIARTQ8N365 385 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF786Q8N393 782 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 C10orf105Q8TEF2 133 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 GTF3AQ92664 365 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 UBE2FQ969M7 185 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF582Q96NG8 517 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 RDH12Q96NR8 316 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 MNTQ99583 582 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 DCLRE1BQ9H816 532 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 NIPAL2Q9H841 368 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 DECR2Q9NUI1 292 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 DNAJC27Q9NZQ0 273 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 ZDHHC8Q9ULC8 765 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 ACANP16112 2415 aa16.2■□□□□ 0.18
PDLIM7-204ENST00000393546 LOC100130705A0A1B0GUX0 176 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 RNF223E7ERA6 249 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SMAD7O15105 426 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 ANXA2P07355 339 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 INHBBP09529 407 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SLC2A1P11166 492 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SLC25A16P16260 332 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SNRPGP62308 76 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 CCL8P80075 99 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 POU4F2Q12837 409 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 GK2Q14410 553 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 TSTQ16762 297 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SNAI3Q3KNW1 292 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 FAM209AQ5JX71 171 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SLC25A30Q5SVS4 291 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 MEDAGQ5VYS4 303 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 LPCAT4Q643R3 524 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 DEGS2Q6QHC5 323 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 USP51Q70EK9 711 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 PGAP1Q75T13 922 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SLC35F2Q8IXU6 374 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 PACRGLQ8N7B6 248 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF540Q8NDQ6 660 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF555Q8NEP9 628 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 ASB17Q8WXJ9 295 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 RDH5Q92781 318 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 COX4I2Q96KJ9 171 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 PIMREGQ9BSJ6 248 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 MSL2Q9HCI7 577 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 FAM118AQ9NWS6 357 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 SMPD3Q9NY59 655 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 KLHDC2Q9Y2U9 406 aa16.19■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF469Q96JG9 3925 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 ZSCAN5BA6NJL1 495 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 ZNF670-ZNF695F2Z2N8 137 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 PHYHO14832 338 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 IGHV1-46P01743 117 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 ADH4P08319 380 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 SBK2P0C263 348 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 ATP6V1E1P36543 226 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 CDK5R2Q13319 367 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 LRRN1Q6UXK5 716 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 MRPL21Q7Z2W9 205 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 OR5AS1Q8N127 324 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 OR8G5Q8NG78 346 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 OR51G2Q8NGK0 314 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 MROQ9BYG7 248 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 EGLN1Q9GZT9 426 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 ADGRL4Q9HBW9 690 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 CLN6Q9NWW5 311 aa16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDLIM7-204ENST00000393546 SNTNA6NMZ2 147 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 IQCF6A8MYZ5 107 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 LYNX1G3V0Z9 82 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 SLC16A6O15403 523 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 TBX1O43435 398 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 XRCC2O43543 280 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 MPZL2O60487 215 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 NCR1O76036 304 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 LYNX1P0DP58 116 aa16.17■□□□□ 0.18
PDLIM7-204ENST00000393546 TNFSF4P23510 183 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms