RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TIGD4Q8IY51 512 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 PARP8Q8N3A8 854 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 CCL17Q92583 94 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 DVL3Q92997 716 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 APOBEC3DQ96AK3 386 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 HAVCR1Q96D42 359 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 MSI2Q96DH6 328 aaKnown RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 CENPNQ96H22 339 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 PLEKHA8Q96JA3 519 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 DCLRE1CQ96SD1 692 aaKnown RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 ABHD6Q9BV23 337 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 C1QTNF5Q9BXJ0 243 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 RIBC2Q9H4K1 309 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 CHODLQ9H9P2 273 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 DDX28Q9NUL7 540 aaKnown RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 DNAJC27Q9NZQ0 273 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 ATPIF1Q9UII2 106 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 TMEFF2Q9UIK5 374 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 GPR160Q9UJ42 338 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 NSD1Q96L73 2696 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 IGHV1-69-2A0A0G2JMI3 117 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZAR1LA6NP61 321 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRR32B1ATL7 298 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF878C9JN71 531 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 H3BSA7 217 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 PSMD9O00233 223 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 MLNRO43193 412 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 HLA-DPB1P04440 258 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ANXA2P07355 339 aaKnown RBP6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 RAC2P15153 192 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 KITLGP21583 273 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 CRYBB2P43320 205 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 CX3CR1P49238 355 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 RGS6P49758 472 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 TPTEP56180 551 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 TNFAIP6P98066 277 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 PPP2R2BQ00005 443 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 HOXA4Q00056 320 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF92Q03936 586 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ECH1Q13011 328 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 MOGQ16653 247 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 GFOD2Q3B7J2 385 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 TEX30Q5JUR7 227 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLX4IPQ5VYV7 408 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 FBXW12Q6X9E4 464 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 COLCA1Q6ZS62 124 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 IL17RELQ6ZVW7 336 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 RFLNBQ8N5W9 214 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF283Q8N7M2 679 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 TCEANCQ8N8B7 351 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR5L1Q8NGL2 311 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 CLDND2Q8NHS1 167 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ITLN1Q8WWA0 313 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 DNAJC9Q8WXX5 260 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 SPTSSAQ969W0 71 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 ELMOD3Q96FG2 381 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR2V2Q96R30 315 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 IL4I1Q96RQ9 567 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 KCNJ15Q99712 375 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 MARCH7Q9H992 704 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 LPAR2Q9HBW0 351 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 BRD7Q9NPI1 651 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 NKIRAS2Q9NYR9 191 aa6.5□□□□□ -1.37
HMGB3P1-201ENST00000393368 FN1P02751 2386 aaKnown RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 LOC100289279A0A1B0GTE1 492 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 A8MV72 311 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 FAM157AC9JC47 383 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ANKRD65E5RJM6 399 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 F5H5P2 479 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 EI24O14681 340 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRODHO43272 600 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 TBX1O43435 398 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 TLX2O43763 284 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF205O95201 554 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 APOL3O95236 402 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 LYNP07948 512 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 TACSTD2P09758 323 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 HSD11B1P28845 292 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 OTX1P32242 354 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 OPRL1P41146 370 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 CHN2P52757 468 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 BLVRAP53004 296 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF121P58317 390 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ESRRGP62508 458 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 MALLQ13021 153 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 HFEQ30201 348 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZIK1Q3SY52 487 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 FAM209AQ5JX71 171 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 C12orf73Q69YU5 71 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 CYB5R2Q6BCY4 276 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 DRAM2Q6UX65 266 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 LRRN1Q6UXK5 716 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 FAM57BQ71RH2 274 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 PGAP1Q75T13 922 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 MRPL21Q7Z2W9 205 aaKnown RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 C1orf174Q8IYL3 243 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF540Q8NDQ6 660 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR8G5Q8NG78 346 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms