RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 LY6HO94772 140 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 SELEP16581 610 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 MMP15P51511 669 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 SNRPGP62308 76 aaKnown RBP12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 TMEM255AQ5JRV8 349 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 SLC25A30Q5SVS4 291 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 DEGS2Q6QHC5 323 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 KRT77Q7Z794 578 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 NAA40Q86UY6 237 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 SLC35F2Q8IXU6 374 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 OR51G2Q8NGK0 314 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 FAM168AQ92567 244 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 VCXQ9H320 206 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 OPA3Q9H6K4 179 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 NIPAL2Q9H841 368 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 ADGRL4Q9HBW9 690 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 FAM118AQ9NWS6 357 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 NKIRAS2Q9NYR9 191 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 KLHDC2Q9Y2U9 406 aa12.84□□□□□ -0.35
IGHV3-53-201ENST00000390627 TRIM64A6NGJ6 449 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF670-ZNF695F2Z2N8 137 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 H0YHG0 523 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 NDUFS8O00217 210 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 SLC16A6O15403 523 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 XRCC2O43543 280 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 ANXA2P07355 339 aaKnown RBP12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 SBK2P0C263 348 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 DAOP14920 347 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 TNK1Q13470 666 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 CARTPTQ16568 116 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 OCLNQ16625 522 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 SNAI3Q3KNW1 292 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 FAM209AQ5JX71 171 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 OGFRL1Q5TC84 451 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 LRRN1Q6UXK5 716 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 MRPL21Q7Z2W9 205 aaKnown RBP12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR52H1Q8NGJ2 320 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 UBASH3BQ8TF42 649 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 DIRC2Q96SL1 478 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 APOL4Q9BPW4 351 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 MROQ9BYG7 248 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 CLN6Q9NWW5 311 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.36
IGHV3-53-201ENST00000390627 LOC390937A0A1W2PQ73 354 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZSCAN5BA6NJL1 495 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 IQCF6A8MYZ5 107 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 H7C1Q1 480 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 TPD52L2O43399 206 aaKnown RBP12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 SPRY3O43610 288 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF254O75437 659 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 ADH4P08319 380 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 SLC2A1P11166 492 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 FOSL1P15407 271 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 SLC25A16P16260 332 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 MAGEB1P43366 347 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 HCCSP53701 268 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF121P58317 390 aaPredicted RBP12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 PSMA6P60900 246 aaKnown RBP12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 SLC34A1Q06495 639 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR2T2Q6IF00 324 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 PGAP1Q75T13 922 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 GTF3AQ92664 365 aaKnown RBP12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 UBE2FQ969M7 185 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 Q96MT0 163 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR8B4Q96RC9 309 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 RNPEPL1Q9HAU8 725 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 DECR2Q9NUI1 292 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 COPS3Q9UNS2 423 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 LRP12Q9Y561 859 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 N6AMT1Q9Y5N5 214 aa12.82□□□□□ -0.36
IGHV3-53-201ENST00000390627 VPS13CQ709C8 3753 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 IGHV4-30-2A0A087WSY4 118 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 DLGAP1O14490 977 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 TBX1O43435 398 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 ENTPD6O75354 484 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 IGHV1-46P01743 117 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 HPXP02790 462 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR2T7P0C7T2 308 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 TNFSF4P23510 183 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 CFL1P23528 166 aaKnown RBP12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 MTNR1AP48039 350 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 RIDAP52758 137 aaKnown RBP12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 CXCR4P61073 352 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 CCL8P80075 99 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 MRPS11P82912 194 aaKnown RBP12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 ROM1Q03395 351 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF92Q03936 586 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 EGR3Q06889 387 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 TSTQ16762 297 aaKnown RBP12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 TIGD6Q17RP2 521 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 GLYATL3Q5SZD4 288 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 TTC23Q5W5X9 447 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms