RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 EGFL6Q8IUX8 553 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 ZNF540Q8NDQ6 660 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 OR5L1Q8NGL2 311 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 SLC25A40Q8TBP6 338 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 MARS2Q96GW9 593 aaKnown RBP13.3□□□□□ -0.28
PDGFB-202ENST00000381551 DUSP21Q9H596 190 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 CMAHPQ9Y471 501 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 TACC2O95359 2948 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 UNC79Q9P2D8 2635 aa13.3□□□□□ -0.28
PDGFB-202ENST00000381551 TMEM269A0A1B0GVZ9 245 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 C5orf63A6NC05 138 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 SRSF10O75494 262 aaKnown RBP13.29□□□□□ -0.28
PDGFB-202ENST00000381551 TACSTD2P09758 323 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 ZNF250P15622 560 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 CRHBPP24387 322 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 C21orf33P30042 268 aaPredicted RBP13.29□□□□□ -0.28
PDGFB-202ENST00000381551 ETV1P50549 477 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 MMP16P51512 607 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 OR12D2P58182 307 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 RPS23P62266 143 aaKnown RBP13.29□□□□□ -0.28
PDGFB-202ENST00000381551 SNAI3Q3KNW1 292 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 LIPNQ5VXI9 398 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 RGS7BPQ6MZT1 257 aaPredicted RBP13.29□□□□□ -0.28
PDGFB-202ENST00000381551 AHSA2Q719I0 299 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 YIPF7Q8N8F6 280 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 COG8Q96MW5 612 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 MYCBPQ99417 103 aaPredicted RBP13.29□□□□□ -0.28
PDGFB-202ENST00000381551 ALG8Q9BVK2 526 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 OR2J1Q9GZK6 312 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 LIME1Q9H400 295 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 POFUT1Q9H488 388 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 SP140LQ9H930 580 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 PAK1IP1Q9NWT1 392 aaPredicted RBP13.29□□□□□ -0.28
PDGFB-202ENST00000381551 ZNF319Q9P2F9 582 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 TPRKBQ9Y3C4 175 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 N6AMT1Q9Y5N5 214 aa13.29□□□□□ -0.28
PDGFB-202ENST00000381551 APCP25054 2843 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 ACOD1A6NK06 481 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 PNPP00491 289 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 CD8AP01732 235 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 ANXA2P07355 339 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 PSMA6P60900 246 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 SLC35A2P78381 396 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 EFNB3Q15768 340 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 MST1LQ2TV78 715 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 TP53I3Q53FA7 332 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 RBM48Q5RL73 367 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 SPATA46Q5T0L3 261 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 MBNL2Q5VZF2 373 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 C20orf204Q6ZNR8 217 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 FAM57BQ71RH2 274 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 LRP11Q86VZ4 500 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 FBXL14Q8N1E6 418 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 SYS1Q8N2H4 156 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 MUC15Q8N387 334 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 ZNF786Q8N393 782 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 STX19Q8N4C7 294 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 OR52H1Q8NGJ2 320 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 SYNPRQ8TBG9 265 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 KLF14Q8TD94 323 aaPredicted RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 SGCDQ92629 289 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 NRGNQ92686 78 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 RORBQ92753 470 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 MYDGFQ969H8 173 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 MRPL24Q96A35 216 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 SGK3Q96BR1 496 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 SIGLEC11Q96RL6 698 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 MRPL37Q9BZE1 423 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 ISG20L2Q9H9L3 353 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 BRD7Q9NPI1 651 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 FAIMQ9NVQ4 179 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 FAM206AQ9NX38 181 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 CLEC2DQ9UHP7 191 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 DUSP13Q9UII6 198 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 GNG8Q9UK08 70 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 FZR1Q9UM11 496 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 EXOSC1Q9Y3B2 195 aaKnown RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 R4GMQ9 66 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 RAI1Q7Z5J4 1906 aaPredicted RBP13.28□□□□□ -0.28
PDGFB-202ENST00000381551 CACNA1DQ01668 2161 aa13.28□□□□□ -0.28
PDGFB-202ENST00000381551 B9A039 149 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 J3QLW9 94 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 RPP14O95059 124 aaKnown RBP13.27□□□□□ -0.29
PDGFB-202ENST00000381551 CLPTM1O96005 669 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 CDK1P06493 297 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 SOD3P08294 240 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 ZNF19P17023 458 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 EVX1P49640 407 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 ACTA2P62736 377 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 ACTG2P63267 376 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 GK2Q14410 553 aaPredicted RBP13.27□□□□□ -0.29
PDGFB-202ENST00000381551 HLXQ14774 488 aaPredicted RBP13.27□□□□□ -0.29
PDGFB-202ENST00000381551 SWI5Q1ZZU3 235 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 AGAP6Q5VW22 663 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 RNLSQ5VYX0 342 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 FBXW12Q6X9E4 464 aa13.27□□□□□ -0.29
PDGFB-202ENST00000381551 IGFBPL1Q8WX77 278 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 447.9 ms