RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LRRN1Q6UXK5 716 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 NLRC3Q7RTR2 1065 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 OR5AS1Q8N127 324 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 RNF148Q8N7C7 305 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 FAM86B1Q8N7N1 296 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 OR4C15Q8NGM1 316 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 OR4K13Q8NH42 304 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 SGMS2Q8NHU3 365 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 DVL3Q92997 716 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-202ENST00000381208 SPTSSAQ969W0 71 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 ATF6BQ99941 703 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 DCAF16Q9NXF7 216 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 CYB5R1Q9UHQ9 305 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 CEACAM18A8MTB9 384 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 ARPC2O15144 300 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 RGS9O75916 674 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-202ENST00000381208 HLA-DQA2P01906 255 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 WNT2P09544 360 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 ACSM4P0C7M7 580 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 RPS2P15880 293 aaKnown RBP10.9□□□□□ -0.66
RPAIN-202ENST00000381208 ZNF823P16415 610 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 RRM2P31350 389 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 HMGA2P52926 109 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 UBA52P62987 128 aaKnown RBP10.9□□□□□ -0.66
RPAIN-202ENST00000381208 HLXQ14774 488 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-202ENST00000381208 KCNJ8Q15842 424 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 MEP1BQ16820 701 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 ZNF620Q6ZNG0 422 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 DOK3Q7L591 496 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-202ENST00000381208 OR10AD1Q8NGE0 317 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 OR11L1Q8NGX0 322 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 OR2T4Q8NH00 348 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 CDRT15Q96T59 188 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-202ENST00000381208 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
RPAIN-202ENST00000381208 MMP26Q9NRE1 261 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 CD300AQ9UGN4 299 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 TAGLN3Q9UI15 199 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 V9GYQ6 96 aa10.9□□□□□ -0.66
RPAIN-202ENST00000381208 F5H5K5 113 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 TRAPPC2LH3BP13 241 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 LCATP04180 440 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 MTNR1AP48039 350 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 ERFP50548 548 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 RAD23AP54725 363 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 GNB2P62879 340 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 PAX8Q06710 450 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 TRAP1Q12931 704 aaKnown RBP10.9□□□□□ -0.67
RPAIN-202ENST00000381208 FOXL1Q12952 345 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 CORO6Q6QEF8 472 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 PGAP1Q75T13 922 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 ZDHHC21Q8IVQ6 265 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 ZDHHC22Q8N966 263 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 PLPP7Q8NBV4 271 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 OR8B3Q8NGG8 313 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 OR52E2Q8NGJ4 325 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 Q8TCH9 128 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 NEIL1Q96FI4 390 aaPredicted RBP10.9□□□□□ -0.67
RPAIN-202ENST00000381208 OR8B2Q96RD0 313 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 TRIM15Q9C019 465 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 OPA3Q9H6K4 179 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 TMEM165Q9HC07 324 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 TRIM36Q9NQ86 728 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 PPIAL4AQ9Y536 164 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 CDH10Q9Y6N8 788 aa10.9□□□□□ -0.67
RPAIN-202ENST00000381208 ARHGAP32A7KAX9 2087 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 OR6C68A6NDL8 312 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 M0R135 149 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 GPANK1O95872 356 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 PRTN3P24158 256 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 GGT2P36268 569 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 CD200P41217 278 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.89□□□□□ -0.67
RPAIN-202ENST00000381208 MZT1Q08AG7 82 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 GK2Q14410 553 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-202ENST00000381208 RSPO1Q2MKA7 263 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-202ENST00000381208 ZNF404Q494X3 552 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 OTPQ5XKR4 325 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 PGBD2Q6P3X8 592 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 CFAP77Q6ZQR2 320 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 MRPL21Q7Z2W9 205 aaKnown RBP10.89□□□□□ -0.67
RPAIN-202ENST00000381208 KLBQ86Z14 1044 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 ARHGAP24Q8N264 748 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 SPERTQ8NA61 448 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 SDR9C7Q8NEX9 313 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 SPRYD4Q8WW59 207 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-202ENST00000381208 RAB40AQ8WXH6 277 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 ZNF799Q96GE5 643 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 MUC13Q9H3R2 512 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 IL20Q9NYY1 176 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 BAIAP2Q9UQB8 552 aa10.89□□□□□ -0.67
RPAIN-202ENST00000381208 IGHV2-70DA0A0C4DH43 119 aa10.88□□□□□ -0.67
RPAIN-202ENST00000381208 F5H5P2 479 aa10.88□□□□□ -0.67
RPAIN-202ENST00000381208 CLDN34H7C241 214 aa10.88□□□□□ -0.67
RPAIN-202ENST00000381208 PHYHO14832 338 aa10.88□□□□□ -0.67
RPAIN-202ENST00000381208 MLNRO43193 412 aa10.88□□□□□ -0.67
RPAIN-202ENST00000381208 HKR1P10072 659 aa10.88□□□□□ -0.67
RPAIN-202ENST00000381208 NPY4RP50391 375 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms