RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 NOX4Q9NPH5 578 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 PDP1Q9P0J1 537 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-202ENST00000380276 RENP00797 406 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 HLA-DQA2P01906 255 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 SFTPBP07988 381 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 NCK1P16333 377 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 HIST1H3AP68431 136 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 HOXA4Q00056 320 aaPredicted RBP19.22■□□□□ 0.67
U2AF1-202ENST00000380276 MAB21L1Q13394 359 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 GK2Q14410 553 aaPredicted RBP19.22■□□□□ 0.67
U2AF1-202ENST00000380276 OR8G1Q15617 311 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 HIST2H3PS2Q5TEC6 136 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 SFRP4Q6FHJ7 346 aaPredicted RBP19.22■□□□□ 0.67
U2AF1-202ENST00000380276 Q6YL49 198 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 CFAP77Q6ZQR2 320 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 HIST2H3AQ71DI3 136 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 MRPL21Q7Z2W9 205 aaKnown RBP19.22■□□□□ 0.67
U2AF1-202ENST00000380276 OR2AJ1Q8NGZ0 328 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 C1RLQ9NZP8 487 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 ERVK-18Q9QC07 812 aa19.22■□□□□ 0.67
U2AF1-202ENST00000380276 DOCK11Q5JSL3 2073 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 DCTN6O00399 190 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 TOX4O94842 621 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 MELTFP08582 738 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 ACSM4P0C7M7 580 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 CFHR2P36980 270 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 MDH1P40925 334 aaKnown RBP19.21■□□□□ 0.67
U2AF1-202ENST00000380276 OMPP47874 163 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 BPIFB3P59826 476 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 DBPQ10586 325 aaPredicted RBP19.21■□□□□ 0.67
U2AF1-202ENST00000380276 COX10Q12887 443 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 OR8B8Q15620 311 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 MPPED2Q15777 294 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 CGB2Q6NT52 195 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 SMARCD3Q6STE5 483 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 PGAP1Q75T13 922 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 OR52J3Q8NH60 311 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 FANK1Q8TC84 345 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 ERGIC1Q969X5 290 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 ATF6BQ99941 703 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 B9D1Q9UPM9 204 aa19.21■□□□□ 0.67
U2AF1-202ENST00000380276 TRBV4-1A0A0J9YWV2 114 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 C3orf80F5H4A9 247 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 P2RY10O00398 339 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 NME4O00746 187 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 DIRAS1O95057 198 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 FSTL3O95633 263 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 CA6P23280 308 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 CD200P41217 278 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 GATA4P43694 442 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 GSK3BP49841 420 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 NPY4RP50391 375 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 FXYD6P3P58550 94 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 KRT72Q14CN4 511 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 KCNJ8Q15842 424 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 SLC36A3Q495N2 470 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 CLEC12AQ5QGZ9 265 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 CD276Q5ZPR3 534 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 ZNF841Q6ZN19 808 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 NAA40Q86UY6 237 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 CELF2-AS1Q8N7Q2 184 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 Q8TCH9 128 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 GATAD2BQ8WXI9 593 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 FAM71F1Q96KD3 344 aaPredicted RBP19.2■□□□□ 0.66
U2AF1-202ENST00000380276 NMNAT3Q96T66 252 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 KCTD14Q9BQ13 255 aaPredicted RBP19.2■□□□□ 0.66
U2AF1-202ENST00000380276 NSRP1Q9H0G5 558 aaKnown RBP19.2■□□□□ 0.66
U2AF1-202ENST00000380276 PRDM13Q9H4Q3 707 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 FN3KRPQ9HA64 309 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 RPRD1BQ9NQG5 326 aaKnown RBP19.2■□□□□ 0.66
U2AF1-202ENST00000380276 RNF7Q9UBF6 113 aa19.2■□□□□ 0.66
U2AF1-202ENST00000380276 IGLV1-36A0A0B4J1U3 117 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 A0A1W2PRQ8 180 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 ZNF879B4DU55 563 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 M0QZ24 198 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 ADAM20O43506 726 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 TXNDC12O95881 172 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 GGT2P36268 569 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 RELBQ01201 579 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 TRAP1Q12931 704 aaKnown RBP19.19■□□□□ 0.66
U2AF1-202ENST00000380276 DGCR6Q14129 220 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 METTL11BQ5VVY1 283 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 COLCA1Q6ZS62 124 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 TSEN54Q7Z6J9 526 aaKnown RBP19.19■□□□□ 0.66
U2AF1-202ENST00000380276 OR6V1Q8N148 313 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 SLC26A10Q8NG04 563 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 OR4K13Q8NH42 304 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 RP9Q8TA86 221 aaKnown RBP19.19■□□□□ 0.66
U2AF1-202ENST00000380276 UBE2FQ969M7 185 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 ADAT1Q9BUB4 502 aaKnown RBP19.19■□□□□ 0.66
U2AF1-202ENST00000380276 FN3KQ9H479 309 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 VIPAS39Q9H9C1 493 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 CTSZQ9UBR2 303 aa19.19■□□□□ 0.66
U2AF1-202ENST00000380276 CLPSL1A2RUU4 121 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 TIMM23O14925 209 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 NDUFA7O95182 113 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 COX4I1P13073 169 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 NOS3P29474 1203 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 PSMB10P40306 273 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 TPTEP56180 551 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms