RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CA10Q9NS85 328 aa7.06□□□□□ -1.28
PDLIM5-204ENST00000380176 ZNF319Q9P2F9 582 aa7.06□□□□□ -1.28
PDLIM5-204ENST00000380176 ASH2LQ9UBL3 628 aa7.06□□□□□ -1.28
PDLIM5-204ENST00000380176 PCSK5Q92824 1860 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 GPR179Q6PRD1 2367 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 A0A1B0GUH1 482 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 WIPF3A6NGB9 483 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 AQP7P3A6NL99 342 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 LDLRAD4O15165 306 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ZIC3O60481 467 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 CD3DP04234 171 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 QDPRP09417 244 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 UBCP0CG48 685 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 VSIG10L2P0DP72 767 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 PRSS3P35030 304 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 PRKXP51817 358 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 CLDN6P56747 220 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 CLDN17P56750 224 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 HIST3H3Q16695 136 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 VHLLQ6RSH7 139 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 GLDNQ6ZMI3 551 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ZNF813Q6ZN06 617 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 TMPPEQ6ZT21 453 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 NLRC3Q7RTR2 1065 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ELMOD2Q8IZ81 293 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ADPRHL1Q8NDY3 354 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 OR52N4Q8NGI2 321 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 OR1J2Q8NGS2 313 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 OR6X1Q8NH79 312 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 C15orf40Q8WUR7 153 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 CHIAQ9BZP6 476 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ZNF436Q9C0F3 470 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 METTL17Q9H7H0 456 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 CNTD2Q9H8S5 307 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 SLC39A1Q9NY26 324 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 EDARQ9UNE0 448 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 NCOR1O75376 2440 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 LOC390937A0A1W2PQ73 354 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 C9J4A7 227 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 CYC1P08574 325 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 GTF2F2P13984 249 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 PRKACAP17612 351 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ADH6P28332 368 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 HTR2BP41595 481 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 TRA2AQ13595 282 aaKnown RBP eCLIP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 PHYHD1Q5SRE7 291 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 SLC23A3Q6PIS1 610 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ZNF782Q6ZMW2 699 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 OR51S1Q8NGJ8 323 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 OR6M1Q8NGM8 313 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 OR51E1Q8TCB6 317 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 GPX8Q8TED1 209 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 SEH1LQ96EE3 360 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 NECAB3Q96P71 396 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 ANGPTL4Q9BY76 406 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 RANBP3Q9H6Z4 567 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 POLR1DQ9Y2S0 133 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 HDGFL3Q9Y3E1 203 aa7.05□□□□□ -1.28
PDLIM5-204ENST00000380176 A0A1B0GTI1 187 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 ANKRD34BA5PLL1 514 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 C5orf63A6NC05 138 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 E9PLN8 166 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 SYT7O43581 403 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 ABOP16442 354 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 EIF1P41567 113 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 DUSP3P51452 185 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 GPR85P60893 370 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 H3F3AP84243 136 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 EXT1Q16394 746 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 LGALSLQ3ZCW2 172 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 DMRTC1Q5HYR2 192 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 C1orf100Q5SVJ3 147 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 RAET1LQ5VY80 246 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 KLHL24Q6TFL4 600 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 OPN5Q6U736 354 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 RTN4RL2Q86UN3 420 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 RPS19BP1Q86WX3 136 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 GTPBP8Q8N3Z3 284 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 PAQR4Q8N4S7 273 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 CLEC1AQ8NC01 280 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 M1APQ8TC57 530 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 SLC25A43Q8WUT9 341 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 ZBTB8AQ96BR9 441 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 ZNF385AQ96PM9 386 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 SPACA5Q96QH8 159 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 CDC6Q99741 560 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 GINS4Q9BRT9 223 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 UTP23Q9BRU9 249 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 SH2D2AQ9NP31 389 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 PNRC2Q9NPJ4 139 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 C12orf4Q9NQ89 552 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 SLC17A5Q9NRA2 495 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 SLC5A6Q9Y289 635 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 NPTNQ9Y639 398 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 NSG1A0A0A6YYJ2 146 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 A0A0G2JMM0 328 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 A0A1W2PPB8 328 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 A0A1W2PRS3 328 aa7.04□□□□□ -1.28
PDLIM5-204ENST00000380176 OR2M5A3KFT3 312 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms