RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 AP1S3Q96PC3 154 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 SEBOXQ9HB31 216 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 TRBV5-5A0A0J9YX44 114 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 KLF4O43474 513 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 DHRS3O75911 302 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 GABRR1P24046 479 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 TVP23CQ96ET8 276 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 BOD1Q96IK1 185 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 MMP28Q9H239 520 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 LEUTXA8MZ59 168 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 GNRHRP30968 328 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 LHX8Q68G74 356 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 LOC105369274A0A096LPK9 316 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 LOC102723532A0A0G2JNH3 316 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 FGF2P09038 288 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 PRTGQ2VWP7 1150 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 OR4N4Q8N0Y3 316 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 LINC00597Q9H2U6 94 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 GLOD5A6NK44 160 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 GEMIN2O14893 280 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PDGFBP01127 241 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SLC6A9P48067 706 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NTHL1P78549 312 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 IGLV3-21P80748 117 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FAM90A1Q86YD7 464 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MTCH2Q9Y6C9 303 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 DCDC2BA2VCK2 349 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MYH7BA7E2Y1 1941 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ITGBL1O95965 494 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 UBE3DQ7Z6J8 389 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 OR5AC2Q9NZP5 309 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SAP18O00422 153 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FOLR2P14207 255 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FAM209BQ5JX69 171 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 HSD17B11Q8NBQ5 300 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NCOR1P1Q9H4R4 102 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 TNFSF10P50591 281 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ADPRHP54922 357 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SHBQ15464 509 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MANBALQ9NQG1 85 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 B4GALNT1Q00973 533 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 COX20Q5RI15 118 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PPP1R3BQ86XI6 285 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 APOBEC3BQ9UH17 382 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 VSIG4Q9Y279 399 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ACAA1P09110 424 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FXYD6P3P58550 94 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 COL19A1Q14993 1142 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 HAS2Q92819 552 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FN3KRPQ9HA64 309 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 GPR84Q9NQS5 396 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FGF21Q9NSA1 209 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 WNT16Q9UBV4 365 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 OPN1SWP03999 348 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 DHRS2Q13268 280 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MEP1BQ16820 701 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 C9orf62Q8N4C0 152 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NKX2-1P43699 371 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SRSF5Q13243 272 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF100Q8IYN0 542 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ST6GALNAC5Q9BVH7 336 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NKX2-4Q9H2Z4 354 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 HIST1H1DP16402 221 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 RGRP47804 291 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 OGFOD3Q6PK18 319 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 DNM1P46Q6ZS02 220 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PTPN18Q99952 460 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 A0A1B0GVG6 124 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FFAR1O14842 300 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 OR5AL1P0C617 328 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 RGS7BPQ6MZT1 257 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF442Q9H7R0 627 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 LUMP51884 338 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 OR2B8PP59922 312 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PRICKLE4Q2TBC4 344 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 C1orf87Q8N0U7 546 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PRRX2Q99811 253 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ARL2-SNX15V9GYD0 113 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 C5P01031 1676 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 MAP1BP46821 2468 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 CCSO14618 274 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ARPC1BO15143 372 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 OR5AC1P0C628 307 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 FOLR1P15328 257 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SELENOIQ9C0D9 397 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 NAA50Q9GZZ1 169 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 EXO1Q9UQ84 846 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 M0R3H8 397 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PLGLAQ15195 96 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 TP53INP2Q8IXH6 220 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ZMYND19Q96E35 227 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 LMLNQ96KR4 655 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 COA4Q9NYJ1 87 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 PLEK2Q9NYT0 353 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 H3BQ06 376 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 B4GALT2O60909 372 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 SEMA7AO75326 666 aa4.45□□□□□ -1.7
PCDH9-201ENST00000377861 RAE1P78406 368 aaKnown RBP4.45□□□□□ -1.7
PCDH9-201ENST00000377861 ZG16BQ96DA0 208 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms