RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ANAPC1Q9H1A4 1944 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 C21orf140B9A014 251 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 MKRN2OSH3BPM6 223 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 K7ESF4 209 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 HSPB6O14558 160 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 BPNT1O95861 308 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 ALDOBP05062 364 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 RBP2P50120 134 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 TAS2R46P59540 309 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 PCK2Q16822 640 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 MRGPREQ86SM8 312 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 CCDC71LQ8N9Z2 235 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 OR5H6Q8NGV6 325 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 C5orf49A4QMS7 147 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 SLC34A2O95436 690 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 GP1BAP07359 652 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 FOXC1Q12948 553 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 RNLSQ5VYX0 342 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 ELMOD2Q8IZ81 293 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 ADIPOR1Q96A54 375 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 TGIF2Q9GZN2 237 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 ACKR4Q9NPB9 350 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF780AO75290 641 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-202ENST00000377797 LALBAP00709 142 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 BGLAPP02818 100 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 MEOX1P50221 254 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 AKR1C2P52895 323 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 TBC1D28Q2M2D7 210 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 BEND4Q6ZU67 534 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 NUP50Q9UKX7 468 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 TANC1Q9C0D5 1861 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 MCRIP1C9JLW8 97 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 TO15178 435 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 TIMM8AO60220 97 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-202ENST00000377797 NGFRP08138 427 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 RPS4Y1P22090 263 aaKnown RBP12.98□□□□□ -0.33
TCOF1-202ENST00000377797 CYCSP99999 105 aaKnown RBP12.98□□□□□ -0.33
TCOF1-202ENST00000377797 PPA1Q15181 289 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 DEGS2Q6QHC5 323 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 OR2M3Q8NG83 312 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 NELFAQ9H3P2 528 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF286AQ9HBT8 521 aa12.98□□□□□ -0.33
TCOF1-202ENST00000377797 MRM2Q9UI43 246 aaKnown RBP12.98□□□□□ -0.33
TCOF1-202ENST00000377797 CNOT4O95628 575 aaKnown RBP12.97□□□□□ -0.33
TCOF1-202ENST00000377797 GAAP10253 952 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 DMKNQ6E0U4 476 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-202ENST00000377797 BATF2Q8N1L9 274 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 GCDHQ92947 438 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-202ENST00000377797 CYSLTR2Q9NS75 346 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 RAC3P60763 192 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 FCN2Q15485 313 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 CCDC28AQ8IWP9 274 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 SPAG16Q8N0X2 631 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 NICN1Q9BSH3 213 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 CEBPGP53567 150 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 GTPBP8Q8N3Z3 284 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-202ENST00000377797 TRAPPC4Q9Y296 219 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 CACNA1GO43497 2377 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 SLC17A2O00624 439 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF806P0C7X5 589 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 CNR1P21554 472 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 OR51S1Q8NGJ8 323 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 RRNAD1Q96FB5 475 aaKnown RBP12.97□□□□□ -0.33
TCOF1-202ENST00000377797 KCNJ15Q99712 375 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 NKX3-1Q99801 234 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-202ENST00000377797 MRPS18AQ9NVS2 196 aaKnown RBP12.97□□□□□ -0.33
TCOF1-202ENST00000377797 UBQLN2Q9UHD9 624 aa12.97□□□□□ -0.33
TCOF1-202ENST00000377797 FRMPD3Q5JV73 1810 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 TGFBR3LH3BV60 316 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 IL2RAP01589 272 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 CDK10Q15131 360 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 ACTBL2Q562R1 376 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 MFSD4AQ8N468 514 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 SPSB2Q99619 263 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 TK1P04183 234 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 IGKV3-11P04433 115 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 LPLP06858 475 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 HLA-DOBP13765 273 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 FAHP16930 419 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 INPP5JQ15735 1006 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-202ENST00000377797 LAIR2Q6ISS4 152 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 MEX3BQ6ZN04 569 aaKnown RBP12.96□□□□□ -0.33
TCOF1-202ENST00000377797 OR6X1Q8NH79 312 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 HS3ST3B1Q9Y662 390 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 OR6C6A6NF89 314 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-202ENST00000377797 SLC9A3R2Q15599 337 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 FBLIM1Q8WUP2 373 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 ASB10Q8WXI3 467 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF700Q9H0M5 742 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 LUZP4Q9P127 313 aa12.96□□□□□ -0.33
TCOF1-202ENST00000377797 CYC1P08574 325 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 ARR3P36575 388 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 MZT1Q08AG7 82 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 DCAF10Q5QP82 559 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 LCN10Q6JVE6 187 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 OR5AS1Q8N127 324 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms