RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MAGIXQ9H6Y5 334 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 TMEM100Q9NV29 134 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 CDH10Q9Y6N8 788 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 F5H5K5 113 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 TNFRSF11BO00300 401 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 MLNRO43193 412 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 FAM107AO95990 144 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 WNT2P09544 360 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 RPS2P15880 293 aaKnown RBP17.65■□□□□ 0.42
VSX1-201ENST00000376707 CPT2P23786 658 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 RSPO1Q2MKA7 263 aaPredicted RBP17.65■□□□□ 0.42
VSX1-201ENST00000376707 COLCA1Q6ZS62 124 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 MOGAT3Q86VF5 341 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 SDR9C7Q8NEX9 313 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 DDOQ99489 341 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 ATF6BQ99941 703 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 SSBP3Q9BWW4 388 aaPredicted RBP17.65■□□□□ 0.42
VSX1-201ENST00000376707 C1QTNF5Q9BXJ0 243 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 FN3KQ9H479 309 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 TMEM165Q9HC07 324 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 IL20Q9NYY1 176 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 ZNF69Q9UC07 566 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 ARHGAP32A7KAX9 2087 aa17.65■□□□□ 0.42
VSX1-201ENST00000376707 BHLHE40O14503 412 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 LCATP04180 440 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 ACSM4P0C7M7 580 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 CALB2P22676 271 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 GGT2P36268 569 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 MALLQ13021 153 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 TRIM25Q14258 630 aaKnown RBP17.64■□□□□ 0.41
VSX1-201ENST00000376707 KLF17Q5JT82 389 aaPredicted RBP17.64■□□□□ 0.41
VSX1-201ENST00000376707 DHFR2Q86XF0 187 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 C1orf87Q8N0U7 546 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 OR9Q2Q8NGE9 314 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 OR52E2Q8NGJ4 325 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 EGLN3Q9H6Z9 239 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 MIOXQ9UGB7 285 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 CYB5R1Q9UHQ9 305 aa17.64■□□□□ 0.41
VSX1-201ENST00000376707 TENM1Q9UKZ4 2725 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 HLA-DPB1P04440 258 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 T-ENOLP0DO92 83 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 IRF2P14316 349 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 PRSS12P56730 875 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 GNB2P62879 340 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.63■□□□□ 0.41
VSX1-201ENST00000376707 TRAP1Q12931 704 aaKnown RBP17.63■□□□□ 0.41
VSX1-201ENST00000376707 GK2Q14410 553 aaPredicted RBP17.63■□□□□ 0.41
VSX1-201ENST00000376707 ZNF181Q2M3W8 571 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 AWAT1Q58HT5 328 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 CLEC12AQ5QGZ9 265 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 SLC35F1Q5T1Q4 408 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 BTNL3Q6UXE8 466 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 DOK3Q7L591 496 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 KLBQ86Z14 1044 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 CCDC197Q8NCU1 140 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 OR52L1Q8NGH7 329 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 PLEKHA8Q96JA3 519 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 KCNG2Q9UJ96 466 aa17.63■□□□□ 0.41
VSX1-201ENST00000376707 GASTP01350 101 aa17.62■□□□□ 0.41
VSX1-201ENST00000376707 ZNF823P16415 610 aa17.62■□□□□ 0.41
VSX1-201ENST00000376707 TPTEP56180 551 aa17.62■□□□□ 0.41
VSX1-201ENST00000376707 MS4A2Q01362 244 aa17.62■□□□□ 0.41
VSX1-201ENST00000376707 ZNF362Q5T0B9 420 aaPredicted RBP17.62■□□□□ 0.41
VSX1-201ENST00000376707 RASSF6Q6ZTQ3 369 aa17.62■□□□□ 0.41
VSX1-201ENST00000376707 BCL6BQ8N143 479 aaPredicted RBP17.62■□□□□ 0.41
VSX1-201ENST00000376707 SLCO4A1Q96BD0 722 aa17.62■□□□□ 0.41
VSX1-201ENST00000376707 NEIL1Q96FI4 390 aaPredicted RBP17.62■□□□□ 0.41
VSX1-201ENST00000376707 TMEM246Q9BRR3 403 aa17.62■□□□□ 0.41
VSX1-201ENST00000376707 MS4A7Q9GZW8 240 aaPredicted RBP17.62■□□□□ 0.41
VSX1-201ENST00000376707 PNRC2Q9NPJ4 139 aaKnown RBP17.62■□□□□ 0.41
VSX1-201ENST00000376707 MRPL22Q9NWU5 206 aaKnown RBP17.62■□□□□ 0.41
VSX1-201ENST00000376707 PRPF19Q9UMS4 504 aaKnown RBP17.62■□□□□ 0.41
VSX1-201ENST00000376707 A0A1B0GWJ7 208 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 CCNB2O95067 398 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 PRTN3P24158 256 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 CD80P33681 288 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 PAX8Q06710 450 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 ZNF404Q494X3 552 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 FAM201AQ5SY85 155 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 LRRN1Q6UXK5 716 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 PGAP1Q75T13 922 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 NLRC3Q7RTR2 1065 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 MRPL21Q7Z2W9 205 aaKnown RBP17.61■□□□□ 0.41
VSX1-201ENST00000376707 NAA40Q86UY6 237 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 LNX2Q8N448 690 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 OR8B3Q8NGG8 313 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 OR8D4Q8NGM9 314 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 SGMS2Q8NHU3 365 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 SPRYD4Q8WW59 207 aaPredicted RBP17.61■□□□□ 0.41
VSX1-201ENST00000376707 SPTSSAQ969W0 71 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 DUX5Q96PT3 197 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 OR8B2Q96RD0 313 aa17.61■□□□□ 0.41
VSX1-201ENST00000376707 DNAJC9-AS1A6NH13 148 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 M0R135 149 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 SPRY1O43609 319 aaPredicted RBP17.6■□□□□ 0.41
VSX1-201ENST00000376707 FSTL3O95633 263 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 PMELP40967 661 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 GATA4P43694 442 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 BAMBIQ13145 260 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 TUSC1Q2TAM9 212 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms