RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TMPRSS13Q9BYE2 586 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR51B6Q9H340 312 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ICAM5Q9UMF0 924 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 DIDO1Q9BTC0 2240 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 A0A0D9SG52 128 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ADAM10O14672 748 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TNFSF14O43557 240 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SSX5O60225 188 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF354AO60765 605 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 WISP1O95388 367 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IFNA21P01568 189 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IL5P05113 134 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FOLR1P15328 257 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 EGR3Q06889 387 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC26A10Q8NG04 563 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 C11orf40Q8WZ69 217 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC25A28Q96A46 364 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CNTNAP3BQ96NU0 1288 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TXNIPQ9H3M7 391 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RABL2AQ9UBK7 228 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 KIF25Q9UIL4 384 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LDOC1O95751 146 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IL33O95760 270 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RD3LP0DJH9 198 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FCGR2AP12318 317 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TPT1P13693 172 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZP3P21754 424 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CD80P33681 288 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CLDN17P56750 224 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FOXF1Q12946 379 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SP6Q3SY56 376 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ELFN2Q5R3F8 820 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MANEAQ5SRI9 462 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MARC2Q969Z3 335 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GAREM1Q9H706 876 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TLCD2A6NGC4 264 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC37A1P57057 533 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MRPS21P82921 87 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PDSS1Q5T2R2 415 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PLXDC1Q8IUK5 500 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SPICQ8N5J4 248 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 BVESQ8NE79 360 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GPBAR1Q8TDU6 330 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SARGQ9BW04 601 aa12.88□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RFPL4AA6NLU0 287 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RFPL4AL1F8VTS6 287 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IL32P24001 234 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FOXK1P85037 733 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MEF2DQ14814 521 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ELAVL1Q15717 326 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HSD17B11Q8NBQ5 300 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR2I1PQ8NGU4 316 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 EMC3Q9P0I2 261 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CHD9Q3L8U1 2897 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 VPS13AQ96RL7 3174 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC26A5P58743 744 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IL10RAQ13651 578 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 C11orf87Q6NUJ2 197 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 H1FNTQ75WM6 255 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR1M1Q8NGA1 313 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 THRSPQ92748 146 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZC3H10Q96K80 434 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NPAS1Q99742 590 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ARPC5LQ9BPX5 153 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SOX7Q9BT81 388 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC19A3Q9BZV2 496 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PCDHGA1Q9Y5H4 931 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CTDSPLO15194 276 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 DAP3P51398 398 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HSD11B2P80365 405 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SGCBQ16585 318 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 P4HA3Q7Z4N8 544 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CPEB2Q7Z5Q1 589 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RTN4RL2Q86UN3 420 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC22A24Q8N4F4 322 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR5M9Q8NGP3 310 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RNF128Q8TEB7 428 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLAMF9Q96A28 289 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR6C1Q96RD1 312 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 WWTR1Q9GZV5 400 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC22A11Q9NSA0 550 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MMP17Q9ULZ9 603 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FRMPD3Q5JV73 1810 aa12.87□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LAMA1P25391 3075 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IGHV3-64DA0A0J9YX35 117 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TMEM200CA6NKL6 621 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SOCS1O15524 211 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 DIRAS3O95661 229 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LCATP04180 440 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC25A1P53007 311 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IAH1Q2TAA2 248 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NHLRC3Q5JS37 347 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms