RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 PGA3P0DJD8 388 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 CCL4P13236 92 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 MPZP25189 248 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 PTGDSP41222 190 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 NBL1P41271 181 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 AP2S1P53680 142 aaPredicted RBP10.87□□□□□ -0.67
UBR4-203ENST00000375225 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 EXOSC2Q13868 293 aaKnown RBP10.87□□□□□ -0.67
UBR4-203ENST00000375225 GRK1Q15835 563 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 ACTBL2Q562R1 376 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 RNASE10Q5GAN6 216 aaKnown RBP10.87□□□□□ -0.67
UBR4-203ENST00000375225 DCAF12Q5T6F0 453 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 SLC25A47Q6Q0C1 308 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 C3P1Q6ZMU1 363 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 DOK3Q7L591 496 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 MDGA2Q7Z553 956 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 GPAT4Q86UL3 456 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 COMMD2Q86X83 199 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 OR8S1Q8NH09 359 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 POC1BQ8TC44 478 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 INTS12Q96CB8 462 aaKnown RBP10.87□□□□□ -0.67
UBR4-203ENST00000375225 ELMOD3Q96FG2 381 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 HEXA-AS1Q9H8Q6 139 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 PARD6AQ9NPB6 346 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 SLC2A8Q9NY64 477 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 MRPS18BQ9Y676 258 aaKnown RBP10.87□□□□□ -0.67
UBR4-203ENST00000375225 AUP1Q9Y679 476 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 SESN1Q9Y6P5 492 aa10.87□□□□□ -0.67
UBR4-203ENST00000375225 TEX51A0A1B0GUA7 166 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 OR6C65A6NJZ3 312 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 GOSR2O14653 212 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 ZNF354AO60765 605 aaPredicted RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 WISP1O95388 367 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 TTRP02766 147 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 VSIG10L2P0DP72 767 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 PPP3CBP16298 524 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 EIF1AXP47813 144 aaKnown RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 P2RX3P56373 397 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 SEC61A1P61619 476 aaKnown RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 LSM6P62312 80 aaKnown RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 CSNK2A1P68400 391 aaPredicted RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 PLA2G7Q13093 441 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 B3GNTL1Q67FW5 361 aaPredicted RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 ZNF813Q6ZN06 617 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 IDO2Q6ZQW0 420 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 RAB11FIP2Q7L804 512 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 GTPBP8Q8N3Z3 284 aaPredicted RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 BPIFB2Q8N4F0 458 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 C12orf45Q8N5I9 185 aaPredicted RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 ZDHHC22Q8N966 263 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 CHST4Q8NCG5 386 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 LIN37Q96GY3 246 aaPredicted RBP10.86□□□□□ -0.67
UBR4-203ENST00000375225 EMC6Q9BV81 110 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 ZNF700Q9H0M5 742 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 POFUT1Q9H488 388 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 PIPOXQ9P0Z9 390 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 B3GAT1Q9P2W7 334 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 GHRLQ9UBU3 117 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 KIF26BQ2KJY2 2108 aa10.86□□□□□ -0.67
UBR4-203ENST00000375225 PCNX3Q9H6A9 2034 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 GPR179Q6PRD1 2367 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 LEUTXA8MZ59 168 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 TRAF3IP2O43734 574 aaPredicted RBP10.85□□□□□ -0.67
UBR4-203ENST00000375225 MT-CO3P00414 261 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 IFNA6P05013 189 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 JMJD7P0C870 316 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 ZNF17P17021 662 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 SSTR2P30874 369 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 S100A11P31949 105 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 ZNF93P35789 620 aaPredicted RBP10.85□□□□□ -0.67
UBR4-203ENST00000375225 CBX5P45973 191 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 SSR4P51571 173 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 DSCR4P56555 118 aaPredicted RBP10.85□□□□□ -0.67
UBR4-203ENST00000375225 CLDN6P56747 220 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 ARL6IP1Q15041 203 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 PCOLCEQ15113 449 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 TRIP6Q15654 476 aaKnown RBP10.85□□□□□ -0.67
UBR4-203ENST00000375225 CDCP2Q5VXM1 449 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 AWAT2Q6E213 333 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 ASPHD2Q6ICH7 369 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 FAHD2BQ6P2I3 314 aaPredicted RBP10.85□□□□□ -0.67
UBR4-203ENST00000375225 CORO6Q6QEF8 472 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 TMPPEQ6ZT21 453 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 OR51A2Q8NGJ7 313 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 KCNG3Q8TAE7 436 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 AQP3Q92482 292 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 MR1Q95460 341 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 FAHD2AQ96GK7 314 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 SCGB3A2Q96PL1 93 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 TAAR9Q96RI9 348 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 GSX2Q9BZM3 304 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 CNTD2Q9H8S5 307 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 FAM86C1Q9NVL1 165 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 COMMD9Q9P000 198 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 OPN4Q9UHM6 478 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 FREM3P0C091 2139 aa10.85□□□□□ -0.67
UBR4-203ENST00000375225 CACNA1HO95180 2353 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms