RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 FEZF1A0PJY2 475 aa8□□□□□ -1.13
UBR4-201ENST00000375218 TRDCB7Z8K6 153 aa8□□□□□ -1.13
UBR4-201ENST00000375218 BLOC1S5-TXNDC5H3BN57 136 aa8□□□□□ -1.13
UBR4-201ENST00000375218 PLPP3O14495 311 aa8□□□□□ -1.13
UBR4-201ENST00000375218 CA1P00915 261 aaPredicted RBP8□□□□□ -1.13
UBR4-201ENST00000375218 KLK1P06870 262 aa8□□□□□ -1.13
UBR4-201ENST00000375218 H2AFZP0C0S5 128 aa8□□□□□ -1.13
UBR4-201ENST00000375218 ARL4AP40617 200 aa8□□□□□ -1.13
UBR4-201ENST00000375218 RFC3P40938 356 aa8□□□□□ -1.13
UBR4-201ENST00000375218 AQP5P55064 265 aa8□□□□□ -1.13
UBR4-201ENST00000375218 MRPS6P82932 125 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 ZNF844Q08AG5 666 aa8□□□□□ -1.13
UBR4-201ENST00000375218 DUOXA1Q1HG43 343 aa8□□□□□ -1.13
UBR4-201ENST00000375218 ZNF528Q3MIS6 628 aa8□□□□□ -1.13
UBR4-201ENST00000375218 PABPC1L2AQ5JQF8 200 aa8□□□□□ -1.13
UBR4-201ENST00000375218 ELFN2Q5R3F8 820 aa8□□□□□ -1.13
UBR4-201ENST00000375218 LDLRAD2Q5SZI1 272 aa8□□□□□ -1.13
UBR4-201ENST00000375218 LYPLAL1Q5VWZ2 237 aa8□□□□□ -1.13
UBR4-201ENST00000375218 PWWP2BQ6NUJ5 590 aa8□□□□□ -1.13
UBR4-201ENST00000375218 H2AFVQ71UI9 128 aa8□□□□□ -1.13
UBR4-201ENST00000375218 Q7L0L9 218 aa8□□□□□ -1.13
UBR4-201ENST00000375218 RELL2Q8NC24 303 aaPredicted RBP8□□□□□ -1.13
UBR4-201ENST00000375218 BEST4Q8NFU0 473 aa8□□□□□ -1.13
UBR4-201ENST00000375218 PCED1BQ96HM7 432 aa8□□□□□ -1.13
UBR4-201ENST00000375218 LMLNQ96KR4 655 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KCTD7Q96MP8 289 aa8□□□□□ -1.13
UBR4-201ENST00000375218 C11orf54Q9H0W9 315 aaPredicted RBP8□□□□□ -1.13
UBR4-201ENST00000375218 CDC42EP4Q9H3Q1 356 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 BPIFA1Q9NP55 256 aa8□□□□□ -1.13
UBR4-201ENST00000375218 SSU72Q9NP77 194 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 CLN8Q9UBY8 286 aa8□□□□□ -1.13
UBR4-201ENST00000375218 TNFSF18Q9UNG2 199 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KIAA0100Q14667 2235 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 KIR2DL5BA0A0G2JN68 375 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KIR2DL5BA0A0G2JPC4 375 aa8□□□□□ -1.13
UBR4-201ENST00000375218 H3BSA7 217 aa8□□□□□ -1.13
UBR4-201ENST00000375218 SPRY2O43597 315 aa8□□□□□ -1.13
UBR4-201ENST00000375218 OR4Q2P0C623 313 aa8□□□□□ -1.13
UBR4-201ENST00000375218 HIST1H1EP10412 219 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 ZNF182P17025 639 aaPredicted RBP8□□□□□ -1.13
UBR4-201ENST00000375218 S100A2P29034 98 aa8□□□□□ -1.13
UBR4-201ENST00000375218 CCKARP32238 428 aa8□□□□□ -1.13
UBR4-201ENST00000375218 DEFA1P59665 94 aa8□□□□□ -1.13
UBR4-201ENST00000375218 PAFAH1B2P68402 229 aa8□□□□□ -1.13
UBR4-201ENST00000375218 HSF1Q00613 529 aa8□□□□□ -1.13
UBR4-201ENST00000375218 EWSR1Q01844 656 aaKnown RBP eCLIP8□□□□□ -1.13
UBR4-201ENST00000375218 ELAVL2Q12926 359 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 UNQ9370/PRO34162Q6UXP9 181 aa8□□□□□ -1.13
UBR4-201ENST00000375218 Q6ZSR9 355 aa8□□□□□ -1.13
UBR4-201ENST00000375218 SLC29A4Q7RTT9 530 aa8□□□□□ -1.13
UBR4-201ENST00000375218 B3GNT8Q7Z7M8 397 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KIR2DL5AQ8N109 375 aa8□□□□□ -1.13
UBR4-201ENST00000375218 OR7G2Q8NG99 324 aa8□□□□□ -1.13
UBR4-201ENST00000375218 OR56A4Q8NGH8 313 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KIR2DL5BQ8NHK3 375 aa8□□□□□ -1.13
UBR4-201ENST00000375218 RPUSD4Q96CM3 377 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 OR52E6Q96RD3 313 aa8□□□□□ -1.13
UBR4-201ENST00000375218 FCRL5Q96RD9 977 aa8□□□□□ -1.13
UBR4-201ENST00000375218 NXF5Q9H1B4 397 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 IKZF5Q9H5V7 419 aa8□□□□□ -1.13
UBR4-201ENST00000375218 ZNF337Q9Y3M9 751 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KIR2DS1A0A191URI9 304 aa8□□□□□ -1.13
UBR4-201ENST00000375218 TINCRA0A1B0GVN0 87 aa8□□□□□ -1.13
UBR4-201ENST00000375218 YJEFN3A6XGL0 299 aa8□□□□□ -1.13
UBR4-201ENST00000375218 SLC16A7O60669 478 aa8□□□□□ -1.13
UBR4-201ENST00000375218 MRPS14O60783 128 aaKnown RBP8□□□□□ -1.13
UBR4-201ENST00000375218 F2RP25116 425 aa8□□□□□ -1.13
UBR4-201ENST00000375218 ADORA2BP29275 332 aa8□□□□□ -1.13
UBR4-201ENST00000375218 PRLHRP49683 370 aa8□□□□□ -1.13
UBR4-201ENST00000375218 PGGT1BP53609 377 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KIR2DS1Q14954 304 aa8□□□□□ -1.13
UBR4-201ENST00000375218 GLYR1Q49A26 553 aaPredicted RBP8□□□□□ -1.13
UBR4-201ENST00000375218 ASTLQ6HA08 431 aaPredicted RBP8□□□□□ -1.13
UBR4-201ENST00000375218 GRHL2Q6ISB3 625 aa8□□□□□ -1.13
UBR4-201ENST00000375218 MFSD6LQ8IWD5 586 aa8□□□□□ -1.13
UBR4-201ENST00000375218 SPPL2BQ8TCT7 592 aa8□□□□□ -1.13
UBR4-201ENST00000375218 ART4Q93070 314 aa8□□□□□ -1.13
UBR4-201ENST00000375218 KIRREL1Q96J84 757 aa8□□□□□ -1.13
UBR4-201ENST00000375218 CWH43Q9H720 699 aa8□□□□□ -1.13
UBR4-201ENST00000375218 MED11Q9P086 117 aa8□□□□□ -1.13
UBR4-201ENST00000375218 TCF20Q9UGU0 1960 aaKnown RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 NUP210Q8TEM1 1887 aaPredicted RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 MYO7AQ13402 2215 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 USP17L23D6RBM5 183 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 H3BS24 57 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 ITM2AO43736 263 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 RAB36O95755 333 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 HSD17B3P37058 310 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 ZXDAP98168 799 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 ZNF763Q0D2J5 394 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 KIAA0141Q14154 515 aaPredicted RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 GALNT16Q8N428 558 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 OR4D5Q8NGN0 318 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 Q8WTZ3 238 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 OR8D1Q8WZ84 308 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 FKBP10Q96AY3 582 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 SMIM3Q9BZL3 60 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 MEGF9Q9H1U4 602 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 TMEM216Q9P0N5 145 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 LSM4Q9Y4Z0 139 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms