RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 EFNA3P52797 238 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 NKX2-5P52952 324 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 BLVRAP53004 296 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 HCCSP53701 268 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PNLIPRP2P54317 469 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 OR1D5P58170 312 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 MRPS10P82664 201 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 MRPS15P82914 257 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 TLE3Q04726 772 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PLCXD2Q0VAA5 305 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 AIMP2Q13155 320 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 MADCAM1Q13477 382 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ALKBH1Q13686 389 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 SF3B4Q15427 424 aaKnown RBP eCLIP4.24□□□□□ -1.732e-10■□□□□ 9.7
USP48-202ENST00000374730 SGCBQ16585 318 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 NTRK2Q16620 822 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 SLC36A2Q495M3 483 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 Q499Y3 187 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 NKAIN2Q5VXU1 208 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 WDR74Q6RFH5 385 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 GALNTL5Q7Z4T8 443 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 CDC20BQ86Y33 519 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PLCZ1Q86YW0 608 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 MISPQ8IVT2 679 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 SPEM1Q8N4L4 309 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 EID2Q8N6I1 236 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 C10orf53Q8N6V4 93 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 Q8N9G6 341 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 ASCC1Q8N9N2 400 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 GATSQ8NAP1 163 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PLPP5Q8NEB5 264 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 OR5H6Q8NGV6 325 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 OR6S1Q8NH40 331 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ZNF563Q8TA94 476 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 LGALS14Q8TCE9 139 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ZFAND1Q8TCF1 268 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 SMIM4Q8WVI0 70 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 TAAR8Q969N4 342 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 OMA1Q96E52 524 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 KLHL15Q96M94 604 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 GAL3ST4Q96RP7 486 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ABHD1Q96SE0 405 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 GFI1Q99684 422 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PDCD1LG2Q9BQ51 273 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 GTPBP2Q9BX10 602 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 TTTY10Q9BZA0 68 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 HDHD2Q9H0R4 259 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 SLITRK2Q9H156 845 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 OR10A4Q9H209 315 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ABCG5Q9H222 651 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 TTYH1Q9H313 450 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 DPAGT1Q9H3H5 408 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 SLA2Q9H6Q3 261 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 WDR76Q9H967 626 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ZNF304Q9HCX3 659 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 RANGRFQ9HD47 186 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 NOX4Q9NPH5 578 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 LIN7CQ9NUP9 197 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 BEX4Q9NWD9 120 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 ANKRD10Q9NXR5 420 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PTTG3PQ9NZH4 202 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 EMC3Q9P0I2 261 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 AKAP7Q9P0M2 348 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 SLC25A10Q9UBX3 287 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 MRM2Q9UI43 246 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 LAMP3Q9UQV4 416 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 KLHDC2Q9Y2U9 406 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ETV7Q9Y603 341 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 FKBP7Q9Y680 259 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 TMEM14AQ9Y6G1 99 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 MAU2Q9Y6X3 613 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 RALGAPA1Q6GYQ0 2036 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 FREM3P0C091 2139 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 KIF26BQ2KJY2 2108 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ASCC3Q8N3C0 2202 aaKnown RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 TRBV5-7A0A0A0MS05 114 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 TMED7-TICAM2A0A0A6YYA0 188 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 A0A1B0GVT2 93 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 TMEM72A0PK05 275 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 NAP1L6A6NFF2 107 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 NPIPB13A6NJU9 1138 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ACOD1A6NK06 481 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 TMEM212A6NML5 194 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 OR4C45A6NMZ5 311 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 A8MV72 311 aaPredicted RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 A8MVM7 634 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 NPIPB4C9JG80 1138 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 GABARAPH6UMI1 98 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RHODO00212 210 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 UBE2CO00762 179 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 BCAT2O15382 392 aaPredicted RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 MAGEB4O15481 346 aaPredicted RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 SCO2O43819 266 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 SDC3O75056 442 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 LDOC1O95751 146 aaPredicted RBP4.23□□□□□ -1.73
USP48-202ENST00000374730 HIST1H2ABP04908 130 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 RAB40ALP0C0E4 278 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 ANKRD34CP0C6C1 535 aa4.23□□□□□ -1.73
USP48-202ENST00000374730 GIMD1P0DJR0 217 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms