RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MRM2Q9UI43 246 aaKnown RBP12.89□□□□□ -0.35
HSPG2-201ENST00000374673 FBXO9Q9UK97 447 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-201ENST00000374673 IKZF2Q9UKS7 526 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 MYRFQ9Y2G1 1151 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 PLEKHA6Q9Y2H5 1048 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 DAPL1A0PJW8 107 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 OVOL3O00110 214 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 SULT1C4O75897 302 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 IGHV3-13P01766 116 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 KRT8P05787 483 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 SLC2A1P11166 492 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 PIPP12273 146 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-201ENST00000374673 ANOS1P23352 680 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 DNASE1P24855 282 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 GCH1P30793 250 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 KLF3P57682 345 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF121P58317 390 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-201ENST00000374673 SELENOVP59797 346 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 CSNK2BP67870 215 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 SNAI3Q3KNW1 292 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 CDONQ4KMG0 1287 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 FBXW12Q6X9E4 464 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 LRP11Q86VZ4 500 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 SYT3Q9BQG1 590 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 PTTG3PQ9NZH4 202 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 CNOT2Q9NZN8 540 aaKnown RBP12.88□□□□□ -0.35
HSPG2-201ENST00000374673 FZR1Q9UM11 496 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
HSPG2-201ENST00000374673 METTL15A6NJ78 407 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 MAGEB4O15481 346 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-201ENST00000374673 XRCC2O43543 280 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 SRSF10O75494 262 aaKnown RBP12.87□□□□□ -0.35
HSPG2-201ENST00000374673 CLPTM1O96005 669 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 ANXA2P07355 339 aaKnown RBP12.87□□□□□ -0.35
HSPG2-201ENST00000374673 DCKP27707 260 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 MPV17P39210 176 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 MMP16P51512 607 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 SNRPD2P62316 118 aaKnown RBP12.87□□□□□ -0.35
HSPG2-201ENST00000374673 MALLQ13021 153 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF829Q3KNS6 432 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-201ENST00000374673 C6orf141Q5SZD1 244 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 EGFL6Q8IUX8 553 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 OR52H1Q8NGJ2 320 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 SNX33Q8WV41 574 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 GGHQ92820 318 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 MYCBPQ99417 103 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF649Q9BS31 505 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 RHNO1Q9BSD3 238 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 CXorf56Q9H5V9 222 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 ERVK13-1Q9NX77 482 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 MYEF2Q9P2K5 600 aaKnown RBP12.87□□□□□ -0.35
HSPG2-201ENST00000374673 DUSP13Q9UII6 198 aa12.87□□□□□ -0.35
HSPG2-201ENST00000374673 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 C5orf63A6NC05 138 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 EFCAB10A6NFE3 127 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 SLC1A7O00341 560 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 DENRO43583 198 aaKnown RBP12.86□□□□□ -0.35
HSPG2-201ENST00000374673 XPNPEP2O43895 674 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 FAM20BO75063 409 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 BMP4P12644 408 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 RAC2P15153 192 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 PAX1P15863 534 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 KITLGP21583 273 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 PPOXP50336 477 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 ACTA2P62736 377 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 ACTG2P63267 376 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 PSG7Q13046 419 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 GALEQ14376 348 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 GK2Q14410 553 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-201ENST00000374673 MOGQ16653 247 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 TMEM255AQ5JRV8 349 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 GLYATL3Q5SZD4 288 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 FAM57BQ71RH2 274 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 KCTD20Q7Z5Y7 419 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 YIPF7Q8N8F6 280 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 BPIFB6Q8NFQ5 453 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 SPSB4Q96A44 273 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 CMBLQ96DG6 245 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 MRPL48Q96GC5 212 aaKnown RBP12.86□□□□□ -0.35
HSPG2-201ENST00000374673 CNBD2Q96M20 576 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 ALG8Q9BVK2 526 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 CACNG6Q9BXT2 260 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 Q9H521 79 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 OPA3Q9H6K4 179 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 MOB1AQ9H8S9 216 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-201ENST00000374673 FKBP14Q9NWM8 211 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 PSORS1C1Q9UIG5 152 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 DIMT1Q9UNQ2 313 aaKnown RBP12.86□□□□□ -0.35
HSPG2-201ENST00000374673 R4GMQ9 66 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 PMF1-BGLAPU3KQ54 211 aa12.86□□□□□ -0.35
HSPG2-201ENST00000374673 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 H7C417 338 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 M0R233 179 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms