RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 LIFP15018 202 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 GUCA1AP43080 201 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-202ENST00000374487 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 TOMM20Q15388 145 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 LAMTOR1Q6IAA8 161 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 CFAP77Q6ZQR2 320 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 ELMOD2Q8IZ81 293 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-202ENST00000374487 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 IL22RA1Q8N6P7 574 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 FOXRED1Q96CU9 486 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-202ENST00000374487 SORCS2Q96PQ0 1159 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 HPF1Q9NWY4 346 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 MYEF2Q9P2K5 600 aaKnown RBP10.72□□□□□ -0.69
HMGCL-202ENST00000374487 ASH2LQ9UBL3 628 aa10.72□□□□□ -0.69
HMGCL-202ENST00000374487 CACNA1BQ00975 2339 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 MEIKINA0A087WXM9 373 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 ZNF878C9JN71 531 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 ICMTO60725 284 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 TSC22D2O75157 780 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 NDUFB6O95139 128 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 TTRP02766 147 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 FCER2P06734 321 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 RAD52P43351 418 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 DSCR4P56555 118 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-202ENST00000374487 RPS18P62269 152 aaKnown RBP10.71□□□□□ -0.69
HMGCL-202ENST00000374487 ADGRE4PQ86SQ3 457 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 BIVMQ86UB2 503 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 COMMD2Q86X83 199 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 OR5D14Q8NGL3 314 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 GPN1Q9HCN4 374 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-202ENST00000374487 ZFP64Q9NPA5 681 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 ZNF69Q9UC07 566 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 DKKL1Q9UK85 242 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 LHFPL6Q9Y693 200 aa10.71□□□□□ -0.69
HMGCL-202ENST00000374487 LOC102725191A0A1B0GVB3 256 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 PMS2P2O95744 297 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 ANXA7P20073 488 aaKnown RBP10.7□□□□□ -0.7
HMGCL-202ENST00000374487 BDKRB2P30411 391 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 CLDN17P56750 224 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 RBMS2Q15434 407 aaKnown RBP10.7□□□□□ -0.7
HMGCL-202ENST00000374487 TMEM81Q6P7N7 255 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 SLC25A47Q6Q0C1 308 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 CREB3L2Q70SY1 520 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 OR4C16Q8NGL9 310 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 OR10S1Q8NGN2 331 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 OR8S1Q8NH09 359 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 PAQR8Q8TEZ7 354 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 SEC22CQ9BRL7 303 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 ZNF436Q9C0F3 470 aaPredicted RBP10.7□□□□□ -0.7
HMGCL-202ENST00000374487 B3GNT4Q9C0J1 378 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 PTTG3PQ9NZH4 202 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 NKX2-8O15522 239 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 CREBL2O60519 120 aaPredicted RBP10.7□□□□□ -0.7
HMGCL-202ENST00000374487 AKAIN1P0CW23 69 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 NR2C1P13056 603 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 GABRA1P14867 456 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 KLK2P20151 261 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 PRKXP51817 358 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 CAPZA1P52907 286 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 ACTBP60709 375 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 ACTG1P63261 375 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 ZNF239Q16600 458 aaKnown RBP10.7□□□□□ -0.7
HMGCL-202ENST00000374487 C1orf100Q5SVJ3 147 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 C6orf15Q6UXA7 325 aaPredicted RBP10.7□□□□□ -0.7
HMGCL-202ENST00000374487 GLDNQ6ZMI3 551 aaPredicted RBP10.7□□□□□ -0.7
HMGCL-202ENST00000374487 Q6ZTK2 550 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 OR6N1Q8NGY5 312 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 MED30Q96HR3 178 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 GINS4Q9BRT9 223 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 TMEM138Q9NPI0 162 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 SCP2D1Q9UJQ7 156 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 PADI1Q9ULC6 663 aa10.7□□□□□ -0.7
HMGCL-202ENST00000374487 SMG1Q96Q15 3661 aaKnown RBP10.69□□□□□ -0.7
HMGCL-202ENST00000374487 METTL21EPA6NDL7 271 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 MASP2O00187 686 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 RER1O15258 196 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 EIF1BO60739 113 aaKnown RBP10.69□□□□□ -0.7
HMGCL-202ENST00000374487 IGHEP01854 428 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 CD3DP04234 171 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 RLN1P04808 185 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 CD63P08962 238 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 CD37P11049 281 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 ZNF20P17024 532 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 OTX2P32243 289 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 MLF1P58340 268 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 PSMA6P60900 246 aaKnown RBP10.69□□□□□ -0.7
HMGCL-202ENST00000374487 SSBP1Q04837 148 aaKnown RBP10.69□□□□□ -0.7
HMGCL-202ENST00000374487 SGCAQ16586 387 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 HIST3H3Q16695 136 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 C6orf183Q5T699 404 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 OR10K2Q6IF99 312 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 ZNF813Q6ZN06 617 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 RHOUQ7L0Q8 258 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 OR4D6Q8NGJ1 314 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 OR51E1Q8TCB6 317 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 CT55Q8WUE5 264 aa10.69□□□□□ -0.7
HMGCL-202ENST00000374487 METTL17Q9H7H0 456 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms