RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 CD37P11049 281 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 PNLIPP16233 465 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 OR1G1P47890 313 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 HERPUD1Q15011 391 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 TPGS2Q68CL5 300 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ASPHD2Q6ICH7 369 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 BTNL3Q6UXE8 466 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 TMEM183AQ8IXX5 376 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF764Q96H86 408 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 PRRT1Q99946 306 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 KLHL28Q9NXS3 571 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF346Q9UL40 294 aaKnown RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 LOC100289279A0A1B0GTE1 492 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 H3BQ15 152 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 CDC40O60508 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 STK17BO94768 372 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 APODP05090 189 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 DIO1P49895 249 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 HAGHQ16775 308 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 SLC22A25Q6T423 547 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF627Q7L945 461 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ZPLD1Q8TCW7 415 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 MCHR2Q969V1 340 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 SLC41A2Q96JW4 573 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 CNTNAP3Q9BZ76 1288 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 PITPNC1Q9UKF7 332 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF443Q9Y2A4 671 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ARID1AO14497 2285 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 C1QL1O75973 258 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 MMP7P09237 267 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 TMEM11P17152 192 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 EPHA1P21709 976 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 PPM1AP35813 382 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 TAGLN2P37802 199 aaKnown RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 GABRA4P48169 554 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 LSSP48449 732 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 SPINT3P49223 89 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 AFF3P51826 1226 aaKnown RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ADAM8P78325 824 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF616Q08AN1 781 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 SOHLH1Q5JUK2 328 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 NCR3LG1Q68D85 454 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 GVQW1Q8N7I0 195 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 TMEM159Q96B96 161 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ANKRD9Q96BM1 317 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 LMF1Q96S06 567 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 INTS14Q96SY0 518 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 MS4A8Q9BY19 250 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 GPR87Q9BY21 358 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 LPAR2Q9HBW0 351 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 SLC17A5Q9NRA2 495 aa8.56□□□□□ -1.04
SF3A3-201ENST00000373019 USP36Q9P275 1121 aaKnown RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF107Q9UII5 783 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-201ENST00000373019 COL6A3P12111 3177 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 FITM1A5D6W6 292 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 GMFGO60234 142 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 GABRR1P24046 479 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 TMEM64Q6YI46 380 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 CXorf40AQ8TE69 158 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 C2orf15Q8WU43 125 aaKnown RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 PRAP1Q96NZ9 151 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 FAAP24Q9BTP7 215 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 ULBP3Q9BZM4 244 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 SLCO5A1Q9H2Y9 848 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 AHSPQ9NZD4 102 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 COLEC10Q9Y6Z7 277 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 EYSQ5T1H1 3165 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 TCF20Q9UGU0 1960 aaKnown RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 A0A0G2JN53 185 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 SYNDIG1LA6NDD5 238 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 HSD17B6O14756 317 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 GCGP01275 180 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 GUSBP08236 651 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 CHATP28329 748 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 DLK1P80370 383 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 AADACL3Q5VUY0 350 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 RPUSD3Q6P087 351 aaKnown RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 C22orf15Q8WYQ4 148 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 NRTNQ99748 197 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 LANCL2Q9NS86 450 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 FBXL17Q9UF56 701 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 MRM2Q9UI43 246 aaKnown RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 CDV3Q9UKY7 258 aaKnown RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 KLHDC2Q9Y2U9 406 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 PLXNA2O75051 1894 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 MED19A0JLT2 244 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 OR4C45A6NMZ5 311 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 C1QTNF3-AMACRE9PGA6 284 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 ITGB1BP1O14713 200 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 GAPDHP04406 335 aaKnown RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 GALTP07902 379 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 SELEP16581 610 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 CORO1AP31146 461 aaKnown RBP8.55□□□□□ -1.04
SF3A3-201ENST00000373019 PAX5Q02548 391 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 GAS6Q14393 721 aa8.55□□□□□ -1.04
SF3A3-201ENST00000373019 OR1Q1Q15612 314 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms