RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MED30Q96HR3 178 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 FRG2CA6NGY1 282 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 TMEM127O75204 238 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 NTF3P20783 257 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 OTUD1Q5VV17 481 aaPredicted RBP10.47□□□□□ -0.73
VCL-202ENST00000372755 TMEM207Q6UWW9 146 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 FAM103A1Q9BTL3 118 aaKnown RBP10.47□□□□□ -0.73
VCL-202ENST00000372755 ARRDC5A6NEK1 342 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 G3V3Q6 166 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 CXCL13O43927 109 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 COX7A2P2O60397 106 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 LRP3O75074 770 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 ABCD3P28288 659 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 BMI1P35226 326 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 INSM1Q01101 510 aaPredicted RBP10.47□□□□□ -0.73
VCL-202ENST00000372755 SMIM21Q3B7S5 101 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 MZB1Q8WU39 189 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 BCL2L10Q9HD36 194 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 A0A096LPE4 126 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 A0A1W2PPZ6 126 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 SHISA7A6NL88 538 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 IRS1P35568 1242 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 SSBP1Q04837 148 aaKnown RBP10.47□□□□□ -0.73
VCL-202ENST00000372755 RPUSD3Q6P087 351 aaKnown RBP10.47□□□□□ -0.73
VCL-202ENST00000372755 SLC39A7Q92504 469 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 C2orf50Q96LR7 162 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 C10orf90Q96M02 699 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 ZNF835Q9Y2P0 537 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 ARL2-SNX15V9GYD0 113 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 TCRBV5S1A1TA0A578 114 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 DCTN6O00399 190 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 IAPPP10997 89 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 CPN1P15169 458 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 SUMO3P55854 103 aaPredicted RBP10.47□□□□□ -0.73
VCL-202ENST00000372755 H3F3AP84243 136 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 SLC17A1Q14916 467 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 VWA2Q5GFL6 755 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 DYNC2LI1Q8TCX1 351 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 CTDSP1Q9GZU7 261 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 FBXO4Q9UKT5 387 aa10.47□□□□□ -0.73
VCL-202ENST00000372755 SLC22A20A6NK97 555 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 B4GALT3O60512 393 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 SMIM17P0DL12 118 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 HMGA1P17096 107 aaKnown RBP10.46□□□□□ -0.73
VCL-202ENST00000372755 CDK5Q00535 292 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 ACVR1Q04771 509 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 ACSM5Q6NUN0 579 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 CMTM4Q8IZR5 234 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 OR52N5Q8NH56 324 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 SMIM19Q96E16 107 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 SLC2A10O95528 541 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 FAM157BP0CG42 384 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 OR5H8P0DN80 308 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 RRASP10301 218 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 HNF1AP20823 631 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 ELFN2Q5R3F8 820 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
VCL-202ENST00000372755 OR10AD1Q8NGE0 317 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 ARHGDIGQ99819 225 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 SNRPGP15A8MWD9 76 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 H0Y8X5 98 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 MKRN2OSH3BPM6 223 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 TNFSF11O14788 317 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 ICMTO60725 284 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 SPP1P10451 314 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 NECAP1Q8NC96 275 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 UBE2FQ969M7 185 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 FAM117AQ9C073 453 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 FBXO34Q9NWN3 711 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
VCL-202ENST00000372755 TMPRSS11DO60235 418 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 HAAOP46952 286 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 TMED6Q8WW62 240 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 ZDHHC16Q969W1 377 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 RPUSD4Q96CM3 377 aaKnown RBP10.46□□□□□ -0.74
VCL-202ENST00000372755 HDGFL3Q9Y3E1 203 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 IFITM5A6NNB3 132 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 SDCBPO00560 298 aaPredicted RBP10.46□□□□□ -0.74
VCL-202ENST00000372755 OR2J2O76002 312 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 CD80P33681 288 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 NOVA1P51513 510 aaKnown RBP10.46□□□□□ -0.74
VCL-202ENST00000372755 SNRPNP63162 240 aaKnown RBP10.46□□□□□ -0.74
VCL-202ENST00000372755 DUSP2Q05923 314 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 DEFB109BQ30KR1 87 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 RGS7BPQ6MZT1 257 aaPredicted RBP10.46□□□□□ -0.74
VCL-202ENST00000372755 C19orf35Q6ZS72 473 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 OR2T6Q8NHC8 308 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 C16orf52Q8NHV5 167 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 PTDSS2Q9BVG9 487 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 UBE2ZQ9H832 354 aaPredicted RBP10.46□□□□□ -0.74
VCL-202ENST00000372755 RAB18Q9NP72 206 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 MYH8P13535 1937 aa10.46□□□□□ -0.74
VCL-202ENST00000372755 GPX5O75715 221 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 CNN1P51911 297 aaKnown RBP10.45□□□□□ -0.74
VCL-202ENST00000372755 SLC38A6Q8IZM9 456 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 OSR2Q8N2R0 312 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 FBXW5Q969U6 566 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 C8orf44Q96CB5 159 aa10.45□□□□□ -0.74
VCL-202ENST00000372755 FYTTD1Q96QD9 318 aaKnown RBP10.45□□□□□ -0.74
VCL-202ENST00000372755 A0A0A6YYJ9 748 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms