RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 RPE65Q16518 533 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 TCTN3Q6NUS6 607 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 WDR88Q6ZMY6 472 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 DNM1P46Q6ZS02 220 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 C1orf229Q6ZS94 237 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-203ENST00000372232 SSX7Q7RTT5 188 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 LHFPL4Q7Z7J7 247 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 C10orf53Q8N6V4 93 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 STEAP2Q8NFT2 490 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 OR4E2Q8NGC2 313 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 OR1J2Q8NGS2 313 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 OR4C6Q8NH72 309 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 LGALS14Q8TCE9 139 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 ASB17Q8WXJ9 295 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 SMPDL3AQ92484 453 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 RSC1A1Q92681 617 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 TAAR8Q969N4 342 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 AIF1LQ9BQI0 150 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 MS4A8Q9BY19 250 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 ZNF350Q9GZX5 532 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 PCBD2Q9H0N5 130 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 EXO5Q9H790 373 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 CUTCQ9NTM9 273 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 SERGEFQ9UGK8 458 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 KIR2DL5BA0A0G2JN68 375 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 KIR2DL5BA0A0G2JPC4 375 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 TMEM235A6NFC5 223 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 FAM90A27PA6NNH2 459 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 GPR89AB7ZAQ6 455 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 H7BY64 318 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 SYT7O43581 403 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 PLPP2O43688 288 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 DOK2O60496 412 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 DFFBO76075 338 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 OR5AC1P0C628 307 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 GPR89BP0CG08 455 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 ITPKBP27987 946 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 PSMB5P28074 263 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 CD1CP29017 333 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 BSGP35613 385 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 LPAR6P43657 344 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 SLC6A9P48067 706 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 KLF3P57682 345 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-203ENST00000372232 C9orf50Q5SZB4 431 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 PRAMEF8Q5VWM4 474 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 PRAMEF7Q5VXH5 474 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 OR2T2Q6IF00 324 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 OR8G2PQ6IF36 304 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 KIR2DL5AQ8N109 375 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 LINC01555Q8NAE3 123 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 ABHD4Q8TB40 342 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 APOBEC4Q8WW27 367 aaKnown RBP7.94□□□□□ -1.14
ATG4A-203ENST00000372232 METTL21AQ8WXB1 218 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 THOC3Q96J01 351 aaKnown RBP7.94□□□□□ -1.14
ATG4A-203ENST00000372232 PRAP1Q96NZ9 151 aa7.94□□□□□ -1.14
ATG4A-203ENST00000372232 COL4A3Q01955 1670 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 FEZF1A0PJY2 475 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 SMPD2O60906 423 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 PPP1R3DO95685 299 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 TLX1P31314 330 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-203ENST00000372232 SOAT1P35610 550 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 PTTG1IPP53801 180 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 PCBP3P57721 371 aaKnown RBP7.93□□□□□ -1.14
ATG4A-203ENST00000372232 REEP5Q00765 189 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 ZNF529Q6P280 563 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 SLC22A25Q6T423 547 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 FRRS1Q6ZNA5 592 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 TMPPEQ6ZT21 453 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 KCTD9Q7L273 389 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 YAF2Q8IY57 180 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 STT3BQ8TCJ2 826 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 PPP1R1CQ8WVI7 109 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 CORO2AQ92828 525 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 C20orf24Q9BUV8 137 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 CXorf36Q9H7Y0 433 aa7.93□□□□□ -1.14
ATG4A-203ENST00000372232 ISG20L2Q9H9L3 353 aaKnown RBP7.93□□□□□ -1.14
ATG4A-203ENST00000372232 YBX2Q9Y2T7 364 aaKnown RBP7.93□□□□□ -1.14
ATG4A-203ENST00000372232 SPTBN5Q9NRC6 3674 aaKnown RBP7.93□□□□□ -1.14
ATG4A-203ENST00000372232 SZT2Q5T011 3432 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 TRBV11-1A0A0K0K1C0 115 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 PRAMEF26H0Y7S4 382 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 TBX19O60806 448 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 ZNF432O94892 652 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 AIFM1O95831 613 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 MELTFP08582 738 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 ACP5P13686 325 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 MAOAP21397 527 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 TEAD1P28347 426 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 ATP1B3P54709 279 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 RGS8P57771 180 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-203ENST00000372232 DLK1P80370 383 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 ATXN7L3Q14CW9 347 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-203ENST00000372232 MLF2Q15773 248 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-203ENST00000372232 SYPL1Q16563 259 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 KIRREL2Q6UWL6 708 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 TTLL10Q6ZVT0 673 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 GALNTL5Q7Z4T8 443 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 FRMD1Q8N878 549 aa7.92□□□□□ -1.14
ATG4A-203ENST00000372232 LYPD6BQ8NI32 183 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms