RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 GABARAPH6UMI1 98 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 RPS19P39019 145 aaKnown RBP13.27□□□□□ -0.29
NDC1-201ENST00000371429 OR1F12Q8NHA8 337 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 A8MXE2 369 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 SPRY3O43610 288 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 WNT3P56703 355 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 FAM219BQ5XKK7 198 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 LGI3Q8N145 548 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 PLPP5Q8NEB5 264 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 SLC25A21Q9BQT8 299 aaPredicted RBP13.27□□□□□ -0.29
NDC1-201ENST00000371429 A4GNTQ9UNA3 340 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 A0A0U1RQK1 487 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 FBXO24O75426 580 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 CT62P0C5K7 136 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 UBE2IP63279 158 aaKnown RBP13.27□□□□□ -0.29
NDC1-201ENST00000371429 CDK5R1Q15078 307 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 FAHD1Q6P587 224 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 SMIM19Q96E16 107 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 SEH1LQ96EE3 360 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 LOXL4Q96JB6 756 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 RASL10BQ96S79 203 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 UCK1Q9HA47 277 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 SIAEQ9HAT2 523 aa13.27□□□□□ -0.29
NDC1-201ENST00000371429 DNAJB12Q9NXW2 375 aaKnown RBP13.27□□□□□ -0.29
NDC1-201ENST00000371429 TRABD2BA6NFA1 517 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 HTR2BP41595 481 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.26□□□□□ -0.29
NDC1-201ENST00000371429 IAH1Q2TAA2 248 aaPredicted RBP13.26□□□□□ -0.29
NDC1-201ENST00000371429 BRICD5Q6PL45 260 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 TMEM179BQ7Z7N9 219 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 OPA3Q9H6K4 179 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
NDC1-201ENST00000371429 KCNJ16Q9NPI9 418 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 SPTBN2O15020 2390 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 WDR1O75083 606 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 CTU2Q2VPK5 515 aaKnown RBP13.26□□□□□ -0.29
NDC1-201ENST00000371429 SMIM21Q3B7S5 101 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 OR2G2Q8NGZ5 317 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 DUS3LQ96G46 650 aaKnown RBP13.26□□□□□ -0.29
NDC1-201ENST00000371429 S1PR3Q99500 378 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 SHANK3Q9BYB0 1731 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 TEX51A0A1B0GUA7 166 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 A0A1W2PR80 420 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 AGAP14A8MT82 685 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 PRICKLE3O43900 615 aaPredicted RBP13.26□□□□□ -0.29
NDC1-201ENST00000371429 ZNF767PQ75MW2 155 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 CALHM3Q86XJ0 350 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 C17orf112F2Z3M2 114 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 ZNF14P17017 642 aaPredicted RBP13.26□□□□□ -0.29
NDC1-201ENST00000371429 TOMM34Q15785 309 aaPredicted RBP13.26□□□□□ -0.29
NDC1-201ENST00000371429 ISXQ2M1V0 245 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 AADACL4Q5VUY2 407 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 LACC1Q8IV20 430 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 SLC38A9Q8NBW4 561 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 ZG16BQ96DA0 208 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 TECTBQ96PL2 329 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 FBXO34Q9NWN3 711 aa13.26□□□□□ -0.29
NDC1-201ENST00000371429 KIAA1217Q5T5P2 1943 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 GABRA1P14867 456 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 HNF4GQ14541 408 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 TMPRSS11FQ6ZWK6 438 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 H2BFWTQ7Z2G1 175 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 KIAA1456Q9P272 454 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 MBD1Q9UIS9 605 aaPredicted RBP13.25□□□□□ -0.29
NDC1-201ENST00000371429 SERTM1A2A2V5 107 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 F8W036 122 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 JUNBP17275 347 aaPredicted RBP13.25□□□□□ -0.29
NDC1-201ENST00000371429 ANXA7P20073 488 aaKnown RBP13.25□□□□□ -0.29
NDC1-201ENST00000371429 DDOSTP39656 456 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 PRAMEF5Q5TYX0 476 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 PRSS45Q7RTY3 260 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 PRDM6Q9NQX0 595 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 ICE1Q9Y2F5 2266 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 TMIGD3P0DMS9 266 aaPredicted RBP13.25□□□□□ -0.29
NDC1-201ENST00000371429 FAHP16930 419 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 GPR12P47775 334 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CCR9P51686 369 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 RNF165Q6ZSG1 346 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 SUMF1Q8NBK3 374 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 HIF1ANQ9NWT6 349 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 SLC23A1Q9UHI7 598 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 UNC13CQ8NB66 2214 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 RP1P56715 2156 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 TCRBP04435 133 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CT45A6P0DMU7 189 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CT45A5P0DMU8 189 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CT45A7P0DMV0 189 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CT45A8P0DMV1 189 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CT45A9P0DMV2 189 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 OPRM1P35372 400 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 RAB13P51153 203 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 PLA2G7Q13093 441 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 FXNQ16595 210 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CT45A2Q5DJT8 189 aa13.25□□□□□ -0.29
NDC1-201ENST00000371429 CT45A1Q5HYN5 189 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms