RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 KRTCAP3Q53RY4 240 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 LRFN4Q6PJG9 635 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 KRT74Q7RTS7 529 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 SERPINA12Q8IW75 414 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 OR10S1Q8NGN2 331 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 ABHD3Q8WU67 409 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 ZNF775Q96BV0 537 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-203ENST00000369747 SLAMF6Q96DU3 332 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 ST6GAL2Q96JF0 529 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 SLX1AQ9BQ83 275 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 NAA11Q9BSU3 229 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-203ENST00000369747 AUNIPQ9H7T9 357 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 CENPMQ9NSP4 180 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 STEAP1Q9UHE8 339 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 FOXJ3Q9UPW0 622 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 TMEM269A0A1B0GVZ9 245 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 ISG15P05161 165 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 H2BFMP0C1H6 154 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 ATAD3CQ5T2N8 411 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 CHMP1BQ7LBR1 199 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 TOMM5Q8N4H5 51 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 RAB40AQ8WXH6 277 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 SLC7A6Q92536 515 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 HAVCR1Q96D42 359 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 LHFPL6Q9Y693 200 aa15.23■□□□□ 0.03
UBE3D-203ENST00000369747 OR14I1A6ND48 311 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 DOK2O60496 412 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 HLA-DMAP28067 261 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 CDAP32320 146 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 PTH2RP49190 550 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 PLA2G7Q13093 441 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 MTFR2Q6P444 385 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 ZGRF1Q86YA3 2104 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 UBASH3BQ8TF42 649 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 CREB3L1Q96BA8 519 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 S100A16Q96FQ6 103 aaKnown RBP15.22■□□□□ 0.03
UBE3D-203ENST00000369747 EMC7Q9NPA0 242 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 PAQR5Q9NXK6 330 aaPredicted RBP15.22■□□□□ 0.03
UBE3D-203ENST00000369747 ZNF221Q9UK13 617 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 HHLA2Q9UM44 414 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 ALG5Q9Y673 324 aa15.22■□□□□ 0.03
UBE3D-203ENST00000369747 LOC107986453A0A1B0GWG9 222 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 ZNF726A6NNF4 738 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 ZNF716A6NP11 495 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 TGM6O95932 706 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 IGFBP3P17936 291 aaPredicted RBP15.21■□□□□ 0.03
UBE3D-203ENST00000369747 ACHEP22303 614 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 MMP16P51512 607 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 ART1P52961 327 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 CLDN17P56750 224 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 SCAND1P57086 179 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 TBRG1Q3YBR2 411 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 CFAP77Q6ZQR2 320 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 LINGO2Q7L985 606 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.21■□□□□ 0.03
UBE3D-203ENST00000369747 OR9K2Q8NGE7 335 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 GCDHQ92947 438 aaPredicted RBP15.21■□□□□ 0.03
UBE3D-203ENST00000369747 ZNF385AQ96PM9 386 aaKnown RBP15.21■□□□□ 0.03
UBE3D-203ENST00000369747 C1orf198Q9H425 327 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 SEC61A2Q9H9S3 476 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 FAM206AQ9NX38 181 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 NUFIP1Q9UHK0 495 aaKnown RBP15.21■□□□□ 0.03
UBE3D-203ENST00000369747 MCTS1Q9ULC4 181 aaKnown RBP15.21■□□□□ 0.03
UBE3D-203ENST00000369747 COL6A6A6NMZ7 2263 aa15.21■□□□□ 0.03
UBE3D-203ENST00000369747 A8MV72 311 aaPredicted RBP15.21■□□□□ 0.02
UBE3D-203ENST00000369747 CYTIPO60759 359 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 VAMP5O95183 116 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 CD2P06729 351 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 ITGA5P08648 1049 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 QDPRP09417 244 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 FSTP19883 344 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 CDK2P24941 298 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 NKX2-5P52952 324 aaPredicted RBP15.21■□□□□ 0.02
UBE3D-203ENST00000369747 KLF9Q13886 244 aaPredicted RBP15.21■□□□□ 0.02
UBE3D-203ENST00000369747 KCNJ8Q15842 424 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 ABLIM2Q6H8Q1 611 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 ZNF704Q6ZNC4 412 aaPredicted RBP15.21■□□□□ 0.02
UBE3D-203ENST00000369747 CREB3L2Q70SY1 520 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 PLEKHA1Q9HB21 404 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 TAS2R4Q9NYW5 299 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 GDF2Q9UK05 429 aaPredicted RBP15.21■□□□□ 0.02
UBE3D-203ENST00000369747 POU2F3Q9UKI9 436 aa15.21■□□□□ 0.02
UBE3D-203ENST00000369747 NBASA2RRP1 2371 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 INMT-MINDY4F8WBC2 141 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 SULT1B1O43704 296 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 ORC5O43913 435 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 SYNGR4O95473 234 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 TMIGD3P0DMS9 266 aaPredicted RBP15.2■□□□□ 0.02
UBE3D-203ENST00000369747 DCTDP32321 178 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 NTF4P34130 210 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 GDNFP39905 211 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 TMEM69Q5SWH9 247 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 BCL2L15Q5TBC7 163 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 FAM166AQ6J272 317 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 ZNF585AQ6P3V2 769 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 ADGRE4PQ86SQ3 457 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 ZIC4Q8N9L1 334 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 OR13C3Q8NGS6 347 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 PRRG4Q9BZD6 226 aa15.2■□□□□ 0.02
UBE3D-203ENST00000369747 GABARAPH6UMI1 98 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms