RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ITGA5P08648 1049 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 C1QTNF9P0C862 333 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 SNRPBP14678 240 aaKnown RBP14.69□□□□□ -0.06
PHGDH-202ENST00000369409 ABOP16442 354 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 FSTP19883 344 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 APEX1P27695 318 aaKnown RBP14.69□□□□□ -0.06
PHGDH-202ENST00000369409 ECH1Q13011 328 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 CNIH2Q6PI25 160 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 TFAP2EQ6VUC0 442 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 SAMD12Q8N8I0 201 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 CNEP1R1Q8N9A8 125 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 SOX7Q9BT81 388 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 RNF121Q9H920 327 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 SLC17A5Q9NRA2 495 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 ADAM30Q9UKF2 790 aa14.69□□□□□ -0.06
PHGDH-202ENST00000369409 TBX1O43435 398 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 IL18BPO95998 194 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 HLA-HP01893 362 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 APOC1P02654 83 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 AZGP1P25311 298 aaKnown RBP14.68□□□□□ -0.06
PHGDH-202ENST00000369409 MPGP29372 298 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 HGFACQ04756 655 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 ZNF79Q15937 498 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 SLC36A2Q495M3 483 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 PABPC1L2AQ5JQF8 200 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 NSUN5P2Q63ZY6 315 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 FAM131AQ6UXB0 335 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 OR5H6Q8NGV6 325 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 LGALS14Q8TCE9 139 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 FAM71F1Q96KD3 344 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-202ENST00000369409 ZNF275Q9NSD4 429 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-202ENST00000369409 INTS1Q8N201 2190 aaKnown RBP14.68□□□□□ -0.06
PHGDH-202ENST00000369409 NCOR2Q9Y618 2525 aa14.68□□□□□ -0.06
PHGDH-202ENST00000369409 ZNF503-AS2A6NEH8 195 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 FAM25AB3EWG3 89 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 FAM25CB3EWG5 89 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 FAM25GB3EWG6 89 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 SLC19A2O60779 497 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 EIF4EP06730 217 aaKnown RBP14.67□□□□□ -0.06
PHGDH-202ENST00000369409 TPTEP56180 551 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 IFITM3Q01628 133 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 OR2A2Q6IF42 318 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 VWA1Q6PCB0 445 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 DRAM2Q6UX65 266 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 CD163Q86VB7 1156 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 OR1J2Q8NGS2 313 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 ZNF671Q8TAW3 534 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 SNRNP27Q8WVK2 155 aaKnown RBP14.67□□□□□ -0.06
PHGDH-202ENST00000369409 FGGYQ96C11 551 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 WACQ9BTA9 647 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 ABRACLQ9P1F3 81 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 FOXJ3Q9UPW0 622 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 FABP12A6NFH5 140 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 A6NIN4 97 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 IGFBP3P17936 291 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-202ENST00000369409 ELK1P19419 428 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 CLDN12P56749 244 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 SNAI3Q3KNW1 292 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 ZNF324BQ6AW86 544 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-202ENST00000369409 OR51A2Q8NGJ7 313 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 OR1K1Q8NGR3 316 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 ADAT3Q96EY9 351 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-202ENST00000369409 SDHCQ99643 169 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-202ENST00000369409 OCEL1Q9H607 264 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 NOX3Q9HBY0 568 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 ABCB10Q9NRK6 738 aa14.67□□□□□ -0.06
PHGDH-202ENST00000369409 UPK1BO75841 260 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 CD79AP11912 226 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 CCL1P22362 96 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 GNALP38405 381 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 KIR2DL2P43627 348 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-202ENST00000369409 FOXF2Q12947 444 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 KRTAP27-1Q3LI81 207 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 LINC00303Q3SY05 128 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 HIKESHIQ53FT3 197 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 KRTCAP3Q53RY4 240 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 DOK3Q7L591 496 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 LRRC28Q86X40 367 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-202ENST00000369409 CISD2Q8N5K1 135 aaKnown RBP14.66□□□□□ -0.06
PHGDH-202ENST00000369409 PLPP7Q8NBV4 271 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 OR6K3Q8NGY3 331 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 LYZL4Q96KX0 146 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 LIN7BQ9HAP6 207 aa14.66□□□□□ -0.06
PHGDH-202ENST00000369409 A0A0U1RQV5 110 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 MBD3L4A6NDZ8 208 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-202ENST00000369409 MBD3L3A6NE82 208 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-202ENST00000369409 MBD3L5A6NJ08 208 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-202ENST00000369409 TTLL8A6PVC2 850 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 IGLV3-1P01715 115 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 ZNF20P17024 532 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 EVX1P49640 407 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 PER3P56645 1201 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 RTL6Q6ICC9 239 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 ANKRD16Q6P6B7 361 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 SEM1Q6ZVN7 128 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 CPEB3Q8NE35 698 aaKnown RBP14.65□□□□□ -0.06
PHGDH-202ENST00000369409 MBD3L2Q8NHZ7 208 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-202ENST00000369409 NKX3-1Q99801 234 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-202ENST00000369409 SRRQ9GZT4 340 aa14.65□□□□□ -0.06
PHGDH-202ENST00000369409 EXTL2Q9UBQ6 330 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms