RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CRABP1P29762 137 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 PMELP40967 661 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 OMPP47874 163 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 PITPNBP48739 271 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 FXYD6P3P58550 94 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 FGF12P61328 243 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 HIST1H3AP68431 136 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 DEFA6Q01524 100 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 DBPQ10586 325 aaPredicted RBP8.63□□□□□ -1.03
CLRN3-201ENST00000368671 KCNMB1Q16558 191 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 DEFB112Q30KQ8 113 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 HIST2H3PS2Q5TEC6 136 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 PRAMEF6Q5VXH4 476 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 PGM2L1Q6PCE3 622 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 C16orf87Q6PH81 154 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 DPY19L2P2Q6ZN68 376 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 HIST2H3AQ71DI3 136 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 LINC00346Q8IVM7 164 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 OR10S1Q8NGN2 331 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 RP9Q8TA86 221 aaKnown RBP8.63□□□□□ -1.03
CLRN3-201ENST00000368671 ERMAPQ96PL5 475 aaPredicted RBP8.63□□□□□ -1.03
CLRN3-201ENST00000368671 SRA1Q9HD15 236 aaKnown RBP8.63□□□□□ -1.03
CLRN3-201ENST00000368671 KRCC1Q9NPI7 259 aaPredicted RBP8.63□□□□□ -1.03
CLRN3-201ENST00000368671 CLN8Q9UBY8 286 aa8.63□□□□□ -1.03
CLRN3-201ENST00000368671 FAM32AQ9Y421 112 aaKnown RBP8.63□□□□□ -1.03
CLRN3-201ENST00000368671 TRBV4-1A0A0J9YWV2 114 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 KIR2DS1A0A191URI9 304 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 F5H5K5 113 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 SLC22A2O15244 555 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 FAM20BO75063 409 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 TXNDC12O95881 172 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 RENP00797 406 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 NUDT2P50583 147 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 HOXA4Q00056 320 aaPredicted RBP8.62□□□□□ -1.03
CLRN3-201ENST00000368671 MAB21L1Q13394 359 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 SEC23BQ15437 767 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 ZNF181Q2M3W8 571 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 WDR25Q64LD2 544 aaPredicted RBP8.62□□□□□ -1.03
CLRN3-201ENST00000368671 RUSC1-AS1Q66K80 236 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 SMARCD3Q6STE5 483 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 CFAP77Q6ZQR2 320 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 DCDC5Q6ZRR9 648 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 NAA40Q86UY6 237 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 FITM2Q8N6M3 262 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 OR11L1Q8NGX0 322 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 OR52J3Q8NH60 311 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 FANK1Q8TC84 345 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 DACT3Q96B18 629 aaPredicted RBP8.62□□□□□ -1.03
CLRN3-201ENST00000368671 TECTBQ96PL2 329 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 PITX2Q99697 317 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 HOPXQ9BPY8 73 aaPredicted RBP8.62□□□□□ -1.03
CLRN3-201ENST00000368671 KCTD14Q9BQ13 255 aaPredicted RBP8.62□□□□□ -1.03
CLRN3-201ENST00000368671 PCGF1Q9BSM1 259 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 CDADC1Q9BWV3 514 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 SLITRK2Q9H156 845 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 MMADHCQ9H3L0 296 aaPredicted RBP8.62□□□□□ -1.03
CLRN3-201ENST00000368671 FN3KQ9H479 309 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 MARCH7Q9H992 704 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 UFSP2Q9NUQ7 469 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 TMCC3Q9ULS5 477 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 B9D1Q9UPM9 204 aa8.62□□□□□ -1.03
CLRN3-201ENST00000368671 WNK2Q9Y3S1 2297 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 TENM1Q9UKZ4 2725 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 IGLV1-36A0A0B4J1U3 117 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 A0A1W2PRQ8 180 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 KNG1P01042 644 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 HLA-DQA2P01906 255 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 LCATP04180 440 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 CRYBA1P05813 215 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 ACSM4P0C7M7 580 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 H2AFXP16104 143 aaPredicted RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 RHCEP18577 417 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 MDH1P40925 334 aaKnown RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 SRSF4Q08170 494 aaKnown RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 COX10Q12887 443 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 MALLQ13021 153 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 DGCR6Q14129 220 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 GK2Q14410 553 aaPredicted RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 KRT72Q14CN4 511 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 RSPO1Q2MKA7 263 aaPredicted RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 PDLIM3Q53GG5 364 aaPredicted RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 GPR157Q5UAW9 335 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 SLC18B1Q6NT16 456 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 C8orf82Q6P1X6 216 aaPredicted RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 FIP1L1Q6UN15 594 aaKnown RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 COLCA1Q6ZS62 124 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 MRPL21Q7Z2W9 205 aaKnown RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 OR6V1Q8N148 313 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 KIR3DL3Q8N743 410 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 BOLLQ8N9W6 283 aaKnown RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 SLC26A10Q8NG04 563 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 OR2AJ1Q8NGZ0 328 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 OR4K13Q8NH42 304 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 SPRYD4Q8WW59 207 aaPredicted RBP8.61□□□□□ -1.03
CLRN3-201ENST00000368671 SLCO4A1Q96BD0 722 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 NMNAT3Q96T66 252 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 ATF6BQ99941 703 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 RASSF4Q9H2L5 321 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 OR52D1Q9H346 318 aa8.61□□□□□ -1.03
CLRN3-201ENST00000368671 EFCAB1Q9HAE3 211 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms