RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 KCTD18Q6PI47 426 aaPredicted RBP12.13□□□□□ -0.47
PRKN-205ENST00000366897 UQCC3Q6UW78 93 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 RBMS3Q6XE24 437 aaKnown RBP12.13□□□□□ -0.47
PRKN-205ENST00000366897 ZNF440Q8IYI8 595 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 ARHGEF39Q8N4T4 335 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 ASB13Q8WXK3 278 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 AQP3Q92482 292 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 CYTL1Q9NRR1 136 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 UQCC1Q9NVA1 299 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 WDFY3Q8IZQ1 3526 aa12.13□□□□□ -0.47
PRKN-205ENST00000366897 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 PHYHO14832 338 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 FGF16O43320 207 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 RCC1P18754 421 aaPredicted RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 SRSF4Q08170 494 aaKnown RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 ELAVL1Q15717 326 aaKnown RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 MST1LQ2TV78 715 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 FDX2Q6P4F2 183 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 SLC22A18ASQ8N1D0 253 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 C19orf47Q8N9M1 422 aaKnown RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 OR13C9Q8NGT0 318 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 NANPQ8TBE9 248 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 BIN3Q9NQY0 253 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 OR52A1Q9UKL2 312 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 A0A1W2PP11 408 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 EIF3GO75821 320 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRKN-205ENST00000366897 HTR3BO95264 441 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 SERPINA5P05154 406 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 NME2P22392 152 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 SNRPEP62304 92 aaKnown RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 MEF2DQ14814 521 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 DHRS7BQ6IAN0 325 aaPredicted RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 SFT2D1Q8WV19 159 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 SOX7Q9BT81 388 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 MYOZ1Q9NP98 299 aaPredicted RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 EDARQ9UNE0 448 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 SLCO1B1Q9Y6L6 691 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 C9JQL5 133 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 SSX5O60225 188 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 IL2RAP01589 272 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 HNRNPA2B1P22626 353 aaKnown RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 CFPP27918 469 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 OR1D4P47884 311 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 SGCAQ16586 387 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 ADAT3Q96EY9 351 aaPredicted RBP12.12□□□□□ -0.47
PRKN-205ENST00000366897 SLCO5A1Q9H2Y9 848 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 ACKR4Q9NPB9 350 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 G6PC2Q9NQR9 355 aa12.12□□□□□ -0.47
PRKN-205ENST00000366897 METTL21EPA6NDL7 271 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ZNF217O75362 1048 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 FAM157CP0CG43 387 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 VSIG8P0DPA2 414 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 SLC2A1P11166 492 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ARRB1P49407 418 aaPredicted RBP12.11□□□□□ -0.47
PRKN-205ENST00000366897 SWI5Q1ZZU3 235 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 AVPI1Q5T686 147 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 OR1M1Q8NGA1 313 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ZNF519Q8TB69 540 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 PTPMT1Q8WUK0 201 aaPredicted RBP12.11□□□□□ -0.47
PRKN-205ENST00000366897 RNF141Q8WVD5 230 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ASB17Q8WXJ9 295 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 BANF2Q9H503 90 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ZFP57Q9NU63 452 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 LINC00587B1AMM8 73 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 LRP3O75074 770 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 FBXO24O75426 580 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
PRKN-205ENST00000366897 CD79AP11912 226 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 CD1CP29017 333 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 PTGFRP43088 359 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 NR0B1P51843 470 aaKnown RBP12.11□□□□□ -0.47
PRKN-205ENST00000366897 SLC37A1P57057 533 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 S100A10P60903 97 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ROM1Q03395 351 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 PRTGQ2VWP7 1150 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 C16orf47Q6ZP98 133 aaPredicted RBP12.11□□□□□ -0.47
PRKN-205ENST00000366897 MAMDC2Q7Z304 686 aaPredicted RBP12.11□□□□□ -0.47
PRKN-205ENST00000366897 ZNF101Q8IZC7 436 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 TMEM104Q8NE00 496 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 ADAM19Q9H013 955 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 RHOFQ9HBH0 211 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 MED29Q9NX70 200 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 R4GMQ9 66 aa12.11□□□□□ -0.47
PRKN-205ENST00000366897 TRAV36DV7A0A075B6V5 113 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 TEX13DA0A0J9YY54 714 aaPredicted RBP12.1□□□□□ -0.47
PRKN-205ENST00000366897 TO15178 435 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 SNAPINO95295 136 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 ANOS1P23352 680 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 CCINQ13939 588 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 EBPQ15125 230 aaKnown RBP12.1□□□□□ -0.47
PRKN-205ENST00000366897 MICBQ29980 383 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 NRIP2Q9BQI9 281 aa12.1□□□□□ -0.47
PRKN-205ENST00000366897 TWSG1Q9GZX9 223 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms