RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SMIM18P0DKX4 95 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 EBPQ15125 230 aaKnown RBP12.15□□□□□ -0.47
LDB3-202ENST00000361373 Q8IYB0 196 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 S1PR3Q99500 378 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 C20orf85Q9H1P6 137 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 ZMAT3Q9HA38 289 aaKnown RBP12.15□□□□□ -0.47
LDB3-202ENST00000361373 FAM60AQ9NP50 221 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 GLRX2Q9NS18 164 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 UFSP2Q9NUQ7 469 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 FOXJ3Q9UPW0 622 aa12.15□□□□□ -0.47
LDB3-202ENST00000361373 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 SCAF4O95104 1147 aaKnown RBP12.14□□□□□ -0.47
LDB3-202ENST00000361373 TRAPPC2P0DI81 140 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 TRAPPC2BP0DI82 140 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 HNF4GQ14541 408 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 MRM1Q6IN84 353 aaKnown RBP12.14□□□□□ -0.47
LDB3-202ENST00000361373 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 SUMF2Q8NBJ7 301 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 FITM1A5D6W6 292 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 ASPDHA6ND91 283 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 ABCD4O14678 606 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 CELA2BP08218 269 aaPredicted RBP12.14□□□□□ -0.47
LDB3-202ENST00000361373 EDN3P14138 238 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 HCCSP53701 268 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 ANKRD31Q8N7Z5 1873 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 HS3ST1O14792 307 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 ZNF121P58317 390 aaPredicted RBP12.14□□□□□ -0.47
LDB3-202ENST00000361373 RAB4BP61018 213 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 PRSS41Q7RTY9 318 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 SLCO1C1Q9NYB5 712 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 NPY4RP50391 375 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 YBX1P67809 324 aaKnown RBP12.14□□□□□ -0.47
LDB3-202ENST00000361373 SHEQ5VZ18 495 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 STAC2Q6ZMT1 411 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 OR5T1Q8NG75 326 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 SHARPINQ9H0F6 387 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 PLA2G3Q9NZ20 509 aa12.14□□□□□ -0.47
LDB3-202ENST00000361373 GABRA1P14867 456 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 GALP22466 123 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 AADACP22760 399 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 ALDH3B1P43353 468 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 ASAH1Q13510 395 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 AADACL4Q5VUY2 407 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 FJX1Q86VR8 437 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 RBMXL3Q8N7X1 1067 aaKnown RBP12.13□□□□□ -0.47
LDB3-202ENST00000361373 AMER3Q8N944 861 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 DAZAP1Q96EP5 407 aaKnown RBP12.13□□□□□ -0.47
LDB3-202ENST00000361373 CNTNAP3Q9BZ76 1288 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 WDR54Q9H977 334 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 TCFL5Q9UL49 500 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 TGM6O95932 706 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 ZXDAP98168 799 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 HES1Q14469 280 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 LYSMD2Q8IV50 215 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 ST7LQ8TDW4 575 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 TCTEX1D2Q8WW35 142 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
LDB3-202ENST00000361373 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
LDB3-202ENST00000361373 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 MEIKINA0A087WXM9 373 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 TGM4P49221 684 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 DYRK1AQ13627 763 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 NTN4Q9HB63 628 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 SLC6A13Q9NSD5 602 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 LAMP3Q9UQV4 416 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 EFSO43281 561 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 CASP3P42574 277 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 RAB1AP62820 205 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 CDK5Q00535 292 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 CATSPERDQ86XM0 798 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 SFTPA1Q8IWL2 248 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 ZNF808Q8N4W9 903 aaPredicted RBP12.13□□□□□ -0.47
LDB3-202ENST00000361373 OR51S1Q8NGJ8 323 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 HAS2Q92819 552 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 DVL3Q92997 716 aaPredicted RBP12.13□□□□□ -0.47
LDB3-202ENST00000361373 CMTM3Q96MX0 182 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 GNRHR2Q96P88 292 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 SLC22A13Q9Y226 551 aa12.13□□□□□ -0.47
LDB3-202ENST00000361373 PCP4L1A6NKN8 68 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 ST8SIA3O43173 380 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 FAM157BP0CG42 384 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 PCBP3P57721 371 aaKnown RBP12.12□□□□□ -0.47
LDB3-202ENST00000361373 ANKRD16Q6P6B7 361 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 CT55Q8WUE5 264 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 PNLIPRP3Q17RR3 467 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 PMS2CLQ68D20 193 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 OR52W1Q6IF63 320 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 NUFIP2Q7Z417 695 aaKnown RBP12.12□□□□□ -0.47
LDB3-202ENST00000361373 SERPINE3A8MV23 424 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 F6UZH7 168 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 ADH4P08319 380 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 ATF1P18846 271 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms