RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 GTF3C1Q12789 2109 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 TBX19O60806 448 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 CSNK1DP48730 415 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SSBP1Q04837 148 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SHHQ15465 462 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 THEM4Q5T1C6 240 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 FAAP20Q6NZ36 180 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 WDR89Q96FK6 387 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 TOE1Q96GM8 510 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 MIOXQ9UGB7 285 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 CHST2Q9Y4C5 530 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 OR7C2O60412 319 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 OR4E1P0C645 316 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 RRASP10301 218 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 APOBEC1P41238 236 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 CLDN17P56750 224 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 ZP2Q05996 745 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 TOMM34Q15785 309 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 MIDNQ504T8 468 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SOWAHCQ53LP3 525 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 LCORQ96JN0 433 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 THYN1Q9P016 225 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 GATCO43716 136 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 DEFB110Q30KQ9 67 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 RANBP10Q6VN20 620 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 ANGPTL5Q86XS5 388 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 TCEAL8Q8IYN2 117 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 UBE2ZQ9H832 354 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 FLVCR1Q9Y5Y0 555 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 EN2P19622 333 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SLC6A11P48066 632 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SELENBP1Q13228 472 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 C20orf27Q9GZN8 174 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 PLEKHA2Q9HB19 425 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 GNB1P62873 340 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SNRPNP63162 240 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 FBXO46Q6PJ61 603 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 GLIPR1L1Q6UWM5 242 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 PLXDC2Q6UX71 529 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 TMPRSS11FQ6ZWK6 438 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 RBPJLQ9UBG7 517 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 LTBP3Q9NS15 1303 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 OPN1LWP04000 364 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 KCNJ10P78508 379 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 FOXK2Q01167 660 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 OR51H1Q8NH63 302 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 MEGF10Q96KG7 1140 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 STARD5Q9NSY2 213 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 TAAR2Q9P1P5 351 aa12.08□□□□□ -0.48
SRGAP3-201ENST00000360413 SLC25A6P12236 298 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 FPR3P25089 353 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 PTRH1Q86Y79 214 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 IL22RA2Q969J5 263 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 STACQ99469 402 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 MENTQ9BUN1 341 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 DUSP13Q9UII6 198 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 A0A0B4J203 849 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 GFRA2O00451 464 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 GJB5O95377 273 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 DTWD2Q8NBA8 298 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 OR10G3Q8NGC4 313 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 CXorf58Q96LI9 332 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 CGGBP1Q9UFW8 167 aaPredicted RBP12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 IL17BQ9UHF5 180 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 PRAMEF25A6NGN4 478 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 SIGLEC6O43699 453 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 SELENOFO60613 162 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 ATXN1LP0C7T5 689 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 COX5AP20674 150 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 PRAMEF5Q5TYX0 476 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 PRAMEF6Q5VXH4 476 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 OR5M10Q6IEU7 315 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 OR10AD1Q8NGE0 317 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 P2RY12Q9H244 342 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 FITM1A5D6W6 292 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 FAM166BA8MTA8 275 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 CD1CP29017 333 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 DOK3Q7L591 496 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 ABI3BPQ7Z7G0 1075 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 FAM24BQ8N5W8 94 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 TAAR6Q96RI8 345 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 TNFRSF13CQ96RJ3 184 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 TIMM9Q9Y5J7 89 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 GGTA1PQ4G0N0 100 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 VRK3Q8IV63 474 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 SCN5AQ14524 2016 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 CCL14Q16627 93 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 GABRG1Q8N1C3 465 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 AKIP1Q9NQ31 210 aa12.07□□□□□ -0.48
SRGAP3-201ENST00000360413 IGKV6D-41A0A0C4DH26 115 aa12.06□□□□□ -0.48
SRGAP3-201ENST00000360413 LINC01387J3KSC0 135 aa12.06□□□□□ -0.48
SRGAP3-201ENST00000360413 MMP11P24347 488 aa12.06□□□□□ -0.48
SRGAP3-201ENST00000360413 PPOXP50336 477 aa12.06□□□□□ -0.48
SRGAP3-201ENST00000360413 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.06□□□□□ -0.48
SRGAP3-201ENST00000360413 IL2RAP01589 272 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms